Rhopilema esculentum: 135686516
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Entry
135686516 CDS
T09994
Name
(RefSeq) uncharacterized protein LOC135686516
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
res
Rhopilema esculentum
Pathway
res03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135686516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
res03041
]
135686516
03009 Ribosome biogenesis [BR:
res03009
]
135686516
Enzymes [BR:
res01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135686516
Spliceosome [BR:
res03041
]
Complex A
U1 snRNP components
U1 related factors
135686516
Complex B
135686516
Ribosome biogenesis [BR:
res03009
]
Eukaryotic type
Pre-60S particles
Helicases
135686516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Helicase_C_2
CMS1
NACHT
Motif
Other DBs
NCBI-GeneID:
135686516
NCBI-ProteinID:
XP_065058835
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MAEGKGAKDTDDIIPIRPNFKRKIGSVDGNQIKPYGNKIKVNDRKATTEEVEKIRFENGI
EVDTDNCPGPILGFEESNLQTEIIEVLKHRSILIPTPVQMQSLPIQLLGRDLIAIAPTGS
GKTLGYLLPMFAFLKSNTAKITSRNNTSSLIVVPTRELMQQVLDTCESFLGDLNKGNISQ
ERFVTHSHTQRQNQDQLNFISTYQNPVNQFSWNPPSQNTGSQYPNADYGTRQPFFHTTQT
DLKNIDSATGYCVYGICGGVPMKPQIERLKSRVDVIVATPGRLLDLCQRNLLCLKSVRYI
VLDECDKMLDMDLEDQLRKLMAMVMSNEMPQQTSLWSATLPSSLERLARSSVINPITINV
GLKDTVCKNIEQNVIFMHTYQKEKKLLQTIRQTKYPPVLIFVSSITMADEIAQLLKEEEF
FVERLHSQLNQNNRFKILSDFRNGELDVLVGTDLASRGLDIPDITHVINYDTPNSIEDYI
HRCGRTGRFGRHGKATTFLTLECKIAEELKLLLESTGSTVPMALKDTKQFGKTVLKTELG
DRLL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggaaagggtgctaaggacacggacgacattattccaattcgccctaatttc
aaaaggaagatcggatcagttgatggaaatcagataaaaccttatggaaacaaaatcaaa
gtaaatgataggaaagctacaacagaggaagttgaaaaaataagatttgaaaatggaatt
gaagtcgatactgataactgtcctggtcctattttggggttcgaggagtcgaatttgcag
acagaaataatcgaagttctaaaacatcgcagtatattgataccaacaccagtgcagatg
caatctctcccaatccaactattaggcagggatttaattgcaatagctcccactggctct
ggaaaaactcttgggtaccttctgccaatgtttgcctttcttaaaagcaacacagctaaa
atcacgagcagaaacaatacatcctcacttattgttgttccgacaagagagcttatgcag
caagtattggatacttgtgaaagctttctgggtgatttaaacaaaggaaatatttcacag
gaaagatttgttactcattcgcatactcaaagacaaaatcaagaccaattgaatttcata
tcaacttaccagaatccagtgaatcagttttcttggaaccctccatctcagaatacaggt
tcacaatatccaaatgcagattatggcactaggcagccatttttccacacaacacagact
gacttgaaaaacatagactcagcaacaggctattgtgtgtatgggatttgtggaggggtg
ccaatgaagccacaaattgaaagactaaaaagcagagttgatgtaatagttgcaacacct
ggaagacttcttgacttatgtcaaagaaatttgctctgccttaaaagtgtaaggtatata
gttttagatgaatgtgacaagatgttagatatggaccttgaagaccaattgagaaaatta
atggccatggtaatgtcaaatgaaatgcctcaacagacaagtctatggtctgccaccctt
ccttcgtcacttgagagactagcaagatcatctgttatcaacccaatcacaattaatgtg
ggtttgaaagatactgtttgtaagaatatagaacagaatgtgattttcatgcacacttat
caaaaagagaaaaagctgcttcagactatacgccagaccaaatacccaccagtgcttata
tttgtatcatcaatcacaatggctgatgaaattgcacaacttctgaaagaggaagaattc
tttgttgaaagattgcactcccaacttaaccaaaacaaccgtttcaaaatattatctgat
tttagaaatggcgagttagatgtgttagtaggaacagacttggctagtagaggactagat
atacctgacattacacatgtaataaattatgatacaccaaacagtattgaggattatatt
catagatgtggtagaacaggaaggtttggccgacacgggaaggcaacaacatttctcaca
ttagagtgcaaaatagctgaagagttgaaactattgcttgaatcaactggatcaactgtt
cctatggcattaaaggacacaaaacagtttggaaaaacggttttgaaaacagaattaggg
gatagattgttatga
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