Rhopilema esculentum: 135687313
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Entry
135687313 CDS
T09994
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
res
Rhopilema esculentum
Pathway
res03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135687313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
res03041
]
135687313
Enzymes [BR:
res01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135687313
Spliceosome [BR:
res03041
]
Complex A
U2 snRNP components
U2 related factors
135687313
Complex B
135687313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
135687313
NCBI-ProteinID:
XP_065059912
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MGGDTRSRRRERSSSSETDKKKLKKSRRYKKRTYSSEEISSGSEDDFKRVSPEKKKSKSK
SKKKLRESPSPEKRKKRRRSSSSLSSSPERKSSKKKKASKYDSEEESPIKKKKKKHRESR
SRSKSPIKIKSTGGKVKEKYKERKEEKSKKKYDSESGEEDDRQIKEKVKHKDKGKEDGAA
KGTGNRDREKNGEHRKDKEKGEEHHKERHKDQDVDTSSDKEEKVIHREPKEEKTESKEKK
ATKEKETKSKDRDKREKTGEYKEIDKQKERDKDRERERIKDKEREKERDRERGKERDRER
GHKEEERETKEKVRSRDQREDKGRDRDRDRERNRDRDRDQDKERKAPGKDERHRSRKHDR
HDDKETSESKSGKDKSEGAVALDNIEDAMRRRKERVEAWRLARQHKDGEETQEEKVAGKK
WSLEDDDDDDEEDDSVKKNDEKDEEDEVDPLDAYMKEVQKQVKKFNAFGQTAKEKGKTTT
IVTTVVKKAESDMGEKKPEVIEQNQDLMEYSSEEGEKEDILEGNAFAAMKQKKKKELLAA
DHSKIYYRPFRKNFYVEVPDLAKMTDEEVDKYRLELGSIRVVGRDIPKPIKTWAQSGVNN
KILEVLKKCNYEKPTPVQAQGIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHVLDQPPLD
ENDGPIAIIMTPTRELALQIHKETKRFCKPLGLQAVCIYGGSGISEQIAELKRGAEIIVC
TPGRMIDMLTANSGRVTNCRRCTYLVLDEADRMFDMGFEPQVMKIIANIRDDRQTVLFSA
TFPRQLEGLARKLLKSPIEIEVGGRSIVCSDISQHVVVIDEDNKFLKLLELLGMYQDQGS
ILVFVEKQDSADVLFKDLLKRGYPCLSLHGGMDQFDRDSTITDFKNGNIKIMVATSVAAR
GLDVKQLNLVVNYDCPNHFEDYVHRVGRTGRAGNKGVAFTLITPDEGKLAQDIIKALETS
KGAPPEALKTLWQEYKEQMKAEGKKVKREKNKGFGGKGFKFDEEEEAKSNEMKKMQKWAL
GLQDSDDEAEAAENAMDKIEDDLNKAFHDSKPKKAPPQLAPGLAGQQPAVIDQDKMKKAS
SIAAKINIKISQGQNADKTQHAATQILKGGALEQIKGIGLAKQLADKVNAKLNYKAPETE
KEEEGQTEPEKLEKYESEIDINDLPQQARWRITSKETISRVCEVSEAGITVRGSYVPPGS
KVKEGEKRLHLYIESLSERAIQIARAEVRRLLKEELIKFESSTYRPQAGGRYKVV
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggggggtgatactagaagtagacggagagaacgaagctcaagctctgagactgataaa
aagaaattaaaaaagagtcgtcgatacaagaaaaggacgtactccagtgaagaaatcagc
agtggctcagaggacgattttaagcgtgtctcgccagaaaagaaaaaatcaaaatccaag
tctaaaaagaagttaagagaaagtccaagccctgaaaaaaggaaaaaacgaaggagatca
agctcgagtttgtcatcttcaccagaaagaaaatcaagtaaaaagaagaaggcaagtaag
tatgacagtgaagaggaaagccctataaagaaaaagaagaaaaagcatcgcgaaagtcga
agcagaagcaagtctccgataaaaattaaatcaacaggaggaaaggttaaagaaaaatac
aaagaaaggaaagaagaaaagtcgaagaagaagtatgatagtgaaagtggggaggaagat
gacaggcaaataaaggaaaaggtcaagcataaagacaaaggaaaagaagatggagctgca
aaaggcaccggaaatagagacagagagaagaacggagagcatcgtaaagataaagaaaaa
ggtgaagagcatcacaaagaaagacataaagatcaagacgtagacacatctagtgataag
gaagaaaaagttattcatagagaaccaaaagaagaaaagacagagagcaaagaaaagaag
gctacaaaagagaaagagacgaaaagtaaggatagagataagcgagaaaaaactggggaa
tacaaagagatagataaacagaaggagagggataaagatagggaaagagaaaggattaaa
gataaagaaagggaaaaagagcgagatagagaacggggtaaggaacgagatagggaaaga
ggccacaaggaagaagaaagagaaaccaaggaaaaagtgagaagtagagatcaacgggaa
gacaaaggtagggatcgagatcgagatagagagagaaatagagatagagacagggaccag
gacaaagagagaaaagcgcccggaaaggatgaaagacatcgcagcagaaagcatgatcgg
catgatgacaaagagacttctgagagcaaaagtggaaaagataagtcggaaggagctgtt
gctttagataacattgaagatgcaatgagaagaagaaaggaaagagtagaagcatggaga
ttggcaagacagcataaggatggcgaggaaacgcaggaagagaaagtcgcagggaaaaag
tggagtctagaagatgatgatgatgatgacgaggaggatgattcagtgaaaaagaatgat
gagaaggatgaagaggatgaagttgatcctttggacgcatacatgaaagaggttcaaaag
caagtgaagaagttcaatgcattcgggcaaacagcaaaggagaaagggaaaacaaccaca
attgtgacaactgttgtcaaaaaagcagaaagtgatatgggtgaaaagaagccagaagtc
attgaacagaatcaagatctcatggaatattcatcagaagaaggggagaaagaggacatc
cttgaaggcaacgcatttgccgctatgaagcaaaagaagaaaaaagagcttctggctgct
gatcactccaagatttattatcgcccatttaggaaaaatttttatgttgaggttccagat
cttgcaaaaatgactgacgaagaggtagacaaatacagacttgagttaggtagcattaga
gttgtaggaagagatattccaaagccgattaagacttgggctcaatcaggtgtcaacaat
aagatactagaagttctcaagaaatgtaattacgagaagccaaccccggtccaagcgcaa
ggtataccttcgattatgtcaggtcgtgatgtcattggtattgccaaaacaggaagtggg
aaaacattagcatttttgcttccaatgtttagacatgtattagaccagccacctttggat
gagaatgatggaccaattgccattataatgacacccactagagagcttgcattacaaatc
cacaaggagacaaaaaggttctgcaagccactgggtcttcaggccgtgtgtatttatggt
ggaagtgggataagcgagcaaatagctgagctcaagcggggtgctgaaataattgtatgt
acccccggaagaatgattgacatgctaactgcaaacagtgggcgtgtaaccaattgtaga
cgatgcacgtatctagttttagatgaagcagatcgcatgtttgatatgggctttgaacca
caggttatgaagattattgcgaacattagggacgacagacagacggttctgttttctgca
acttttccccgtcagcttgaaggccttgcaaggaaacttttgaaatcgccgattgaaatt
gaagtgggtggacgcagtattgtctgctctgacatttctcagcatgttgttgtaattgat
gaggataacaagtttttgaagctgcttgagttgctagggatgtaccaagatcaaggtagt
atccttgtttttgtagagaaacaggactctgcagatgttctcttcaaggatttgctaaaa
cgtggatatccttgtttgtcattacacgggggtatggatcagtttgatcgcgatagtacg
attactgattttaaaaatggtaacatcaagataatggttgcgacatcagtagccgcacgt
ggccttgatgtcaagcaactcaatttggttgttaactatgactgtccaaatcattttgag
gattacgttcatcgtgtgggtcgcactggtcgtgcaggaaataaaggcgtggcctttact
ctgataacaccggatgaaggaaagcttgcccaagatataatcaaagcgcttgagacatct
aaaggagcaccgccagaggcgctcaagactttgtggcaagaatataaagagcaaatgaaa
gcagaaggaaaaaaggtaaaaagggaaaagaacaagggattcggcggaaaaggcttcaag
tttgacgaagaagaagaagcaaagagcaacgaaatgaaaaaaatgcaaaaatgggcctta
ggcctacaggattcggatgacgaggctgaagcggctgaaaatgcaatggataaaatagaa
gatgacttaaacaaggcattccatgattcaaagcctaagaaagcacctccgcagcttgca
ccaggcctggcagggcagcaaccagcagtcattgatcaagacaagatgaagaaagcttcg
agtattgctgcaaagataaacataaagataagtcagggtcaaaatgcagataaaacacag
catgccgcaacccagattctcaaaggtggggctctagagcagattaagggtattggactg
gctaagcagcttgctgacaaagtaaatgcgaagttgaattataaagcccctgaaacagaa
aaagaagaggagggacagacagagccggagaaattggagaaatatgagtctgaaattgat
attaatgatctaccacagcaagcaagatggaggatcacatccaaagagacgatatcaagg
gtatgtgaagtttcagaagcgggaattacagtcaggggctcgtatgtacccccagggagc
aaggtaaaggagggtgaaaaaagattgcatttgtacatcgagtcattatcagaaagggca
attcaaatagcaagagcagaagtgaggaggttactaaaggaagagctcattaagtttgag
tcatcgacttataggcctcaggcaggtgggcgttataaggtagtatag
DBGET
integrated database retrieval system
