Rhopilema esculentum: 135687486
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Entry
135687486 CDS
T09994
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
res
Rhopilema esculentum
Brite
KEGG Orthology (KO) [BR:
res00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
res03016
]
135687486
Enzymes [BR:
res01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
135687486
Transfer RNA biogenesis [BR:
res03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
135687486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_23
Methyltransf_31
DUF7399
UPF0122
Motif
Other DBs
NCBI-GeneID:
135687486
NCBI-ProteinID:
XP_065060126
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MDVQDGENSLSQKDKVDRERCGFYVKRKRRNCRMLPAKGNKYCAEHLCFQDDQFSANRDD
LHKGNVEISKQTTVKKRVQCPLDPKHTVFEDRLEKHLKKCNSRGKTQQDYFEEHIHSGLL
HCETAEDEKVPLNKIPKMEIYDLIKRVEKCYSESLLKIKKWCGSHPVLKEELDNEEYGES
TRKHFLQQASLIDLLEKNDVFKKDKLAVLEFGAGKGKLSHWLQKAVGNVDNVEYYLIDRQ
NHRHKFDCFHRGENQGPSFKRLYIDIEHLNLAKVSDLTQKNIVGIGKHLCGAATDFSLRC
LAGGDRKQAESNQASKKAKLDHNTNRIELILFALCCYHKCSWPSFVGRDFFAANGFNKTD
FHRITKICSWAVCGVRSIAKDSGDDELLGKEKDEMNTFQLNPEQKKEIGSKCKRLIDLGR
IEYLRKHGYQTELIYFIDSAVTLENVVLLAKPNITNG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggacgttcaagacggtgagaattccttgtctcaaaaggataaagttgatagagaaaga
tgtgggttttatgtaaaaagaaaaaggagaaattgtagaatgttaccagctaaaggaaat
aaatactgtgcagagcatctttgcttccaagatgaccaattttctgcaaatagagatgat
cttcataaaggcaatgttgaaatttcaaaacagacaacagtcaaaaagagagtacagtgc
ccattagatccaaagcatacagtatttgaagatagattggagaagcatttgaagaaatgc
aattcaagaggaaaaacacagcaggactattttgaagaacacatacactccggtttgctt
cattgtgaaactgctgaagatgaaaaggtcccgttgaataagattccaaaaatggaaata
tatgatttgatcaaaagggttgagaaatgctattcggaatcattattaaagatcaaaaag
tggtgtggatcccatccggtattgaaagaagaacttgacaatgaagaatacggtgaaagt
actagaaagcactttttacagcaggcttccttgatcgatttattagaaaaaaatgatgtc
ttcaaaaaagataaattagctgttttagaatttggtgctggcaaaggaaaactatcacac
tggctgcagaaagctgttggtaacgtggataatgtcgagtattacttgatagaccgtcag
aatcatcgtcataagttcgattgctttcacagaggagagaaccagggaccttcgttcaag
aggctttacattgatatcgaacatctcaatcttgctaaggtttcagatttgactcaaaag
aatatcgttggcatcggaaagcatttatgtggagcagccacagatttctcgctaagatgt
cttgctggaggagaccgtaaacaggctgaatcgaatcaggcatcgaaaaaagcgaaactt
gaccataacaccaaccgcattgaactgattttatttgcactatgttgttatcacaaatgc
tcttggccgagctttgtcgggagagatttttttgccgcgaatggattcaacaaaactgat
tttcatcgaattacaaaaatttgtagctgggctgtttgtggtgttcgcagcattgcaaaa
gattctggtgatgatgagttgttgggaaaagaaaaagatgaaatgaatactttccaactt
aaccctgaacagaaaaaagaaatcggttcaaaatgcaagagacttattgacttaggaaga
atagaatacttaagaaagcatgggtatcaaacagaattaatttacttcattgattcagca
gtaactcttgagaatgttgttctacttgcaaagccaaacattactaatggttag
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