Rhopilema esculentum: 135687548
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Entry
135687548 CDS
T09994
Name
(RefSeq) superkiller complex protein 3-like isoform X1
KO
K12600
superkiller protein 3
Organism
res
Rhopilema esculentum
Pathway
res03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135687548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135687548
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
135687548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_19
TPR_11
TPR_17
TPR_14
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_6
TPR_7
ANAPC3
TPR_9
ARM_TT21_C
T7SS_EccA1_N
ARM_TT21_5th
ChAPs
DUF7017
TPR_MalT
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
135687548
NCBI-ProteinID:
XP_065060203
LinkDB
All DBs
Position
Unknown
AA seq
1596 aa
AA seq
DB search
MADSQGKAASKEITAELKAAKEEIKKKEYKEALKHCKNVLKIDKSNYHALVFIGLCAKEM
EQFEQSRAAYQKAIDQNVEQLLAWQGLCNLYEAADKEEWKEDLVKTYSKLIQGSKSDMSR
WKELLAKVIPLQLSLDMTSEALSNLKDLEGASSEPSMELLGHWQRGLNNLMLKLQKEDIT
LELQEQIENTFQSALEYSRVLGLDIEEIQEGHLKKLKQCLREIGDKEKSMFVVNRILEKG
TALLHDFPTNKYALELVIRIRLEQSPEDHSDETAKLIKEFHEIDAANFVGIVGMALIEVQ
TQQWLSALKILKPVQGIASKDFVALYWLLMAKIHLYLYETKDSLAYIKNGMKNIGRCLTE
SGKEIYKQELSKCKAECFMKMRKYEEAKDILIEITQKSKTSNGLYLLGASYAYLKENKRA
AEVCEHLTELQQNASGTLAIKALISMNEEKYYDAELRLQEAMELQGDISEYFYLLGKVYW
QLREKGDEYWRKAHGSFLKAAKLDPFNSDIFFALGEYYRDFVADSRKAQKCFQKAVSLNE
LNEDAAMALGDLSMDLGDEETAVKVYEQVTRNFAAGRVKIAWLRLGLLLTKRGQAEKAVT
CFRSALRSDPEDRHMWECLGDAYIARGSYMPALKAFQKAVELDPENLYSRYKMGVIKQSV
CVYDEAIEEFKKVLAVEEDHIPAWRGLAESHLKTEYACIAENFDGRAVDHAAEALLAAAR
AIELRPDLRCLWKIMGDASFALRVVAEEKLRNDFHSLQVPPSVSQIIGIKEEETGSKKKF
ILDLSRRCYGVVVKLEESSAAAWHDLSLSSFHYGMLLDGELGKTTMQQSVKFIKKAISLE
PGNAKMWNTLGVISGSSGPSLTCCGYSVYDIANPELSQHAFIKALQLDSQNAEIWCNLGT
LYLKYDKIKEAHEAFKRAQDADPEYTPAWIGQASIAEIIGDADAMDLFRHSSEMGSHTEC
YLAYAKWVIFSLKDYFAKQKRSTQRLGPFDLPDFVRKAIANSAVCVQKYTDRMPGNSCAH
NLLGILLEHQQLFKQAETAFRRAYQLLATSEDVNKRNMVLANLARVLRRSGQFKQSIEVY
LQIKPMINANDVTGLALAYFLDSQLEQSFQTYEQALGLAESERDKSDILAAIGIIGYSTG
NSEIAKSFLFKSAQTSSPSERGLSALAALGLLSKDLTLTNAALAEIRKHPDFETEDVQES
FTFLESSLYHLQGNFTEAKRSVQKLIRRYPGSSRQWAKLAKFFSLQTPLLSMEIAGRCAE
ISAVHEPSNVSSLVVAAAASGSKSFASKLDSQSPHVACLRAAQKAVHSNPGQPENWALLS
AAALAKSLCSSGVATRTMAISTARLSLLKAEESLGGLEETLKTTISRQLEPKIKIAINLR
VYSIKQLVWAYLNDGVYNIAMLLSENAMSEYEGHPKIWNDLQYLNVICAILLKSRNGENV
DELLLAAKTLCDSESNSIWRYQVFVGICQKLGLPLLAEFALRKCIQHAVPGSPSSHSSFV
RLFLSSIACYSKDKNERWITLASEALNEFAKLKPGNCLVDLLRMSLFHVQGDSKKAGKIF
QRLTCQTGGTLEDLLKSWGKLYGSQQEEKIDPFDEE
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagtcagggaaaagctgcgagcaaagaaattacagcagaactgaaggctgca
aaagaagagataaagaaaaaagagtataaagaggccctcaagcattgtaagaatgtgctc
aaaattgacaaaagcaattaccatgccttggttttcattggtctctgtgccaaggaaatg
gagcagtttgagcaatcaagagctgcgtaccagaaagcaatagatcagaatgtggaacag
ctacttgcttggcagggtctttgtaacttgtatgaagcagcagacaaagaggaatggaaa
gaagatctagtgaagacctactcaaagttgattcagggaagcaaaagtgatatgagcagg
tggaaggaattgttggcaaaagtaataccattgcaactgtcgctagatatgacatcagag
gccttgtcaaatttgaaagatctggaaggagctagttctgaaccatctatggaattactt
ggtcactggcagagaggcttgaacaatttaatgttaaagctgcagaaagaagacattaca
ttagagttgcaagaacagattgagaacacattccagtctgcattggaatacagcagagta
cttgggctggatattgaagagatacaagaaggacatttaaagaagctgaaacagtgcttg
cgggaaattggagataaagaaaaatcgatgtttgttgtaaacagaatacttgaaaaagga
actgcattgcttcacgatttcccgaccaacaaatatgctctggaattggtgattagaatt
cgcttggaacaatctcctgaagaccattctgacgaaactgcgaagctcatcaaagaattt
catgaaatcgatgctgctaattttgttggtattgttggcatggctctcattgaggtccaa
acacagcaatggctttctgcgctgaaaattctaaagccagtccaaggtattgcaagcaaa
gactttgttgctctctattggcttctgatggcgaaaattcatctatatttatacgaaacc
aaagactcgttggcttacataaagaatgggatgaaaaatatcggtcgatgtttgacagaa
tctgggaaagaaatctataaacaagagcttagtaaatgtaaagccgagtgtttcatgaaa
atgagaaagtatgaagaggcaaaggatattctcatcgagataacacaaaagagcaagact
tcaaatggtttgtacttgctcggagcgtcttatgcatacctcaaagaaaacaaaagagct
gccgaggtttgcgaacatcttacagaactccaacaaaatgcctctggaacactggcaatc
aaggcattgataagtatgaacgaagaaaagtattatgatgcagaattgaggctacaagaa
gcaatggaactgcagggagatatttccgaatatttttatttacttggaaaagtttactgg
caactgcgtgagaaaggcgatgaatattggaggaaagctcacggctccttcttaaaggct
gctaagctggaccctttcaattcggatattttctttgcgctcggtgaatattacagagat
tttgttgcagactcaagaaaagcccaaaaatgtttccaaaaagcagtgtccctgaatgag
ctgaacgaggacgctgccatggcgcttggtgacttgtctatggatctcggcgatgaggaa
actgctgtcaaagtctacgagcaagttaccaggaattttgctgctggcagggtaaaaatt
gcttggctccgactgggcttgctgctcacaaaacgaggacaggcagaaaaggcagtcacg
tgctttcgaagtgcattgcgatctgaccctgaagataggcacatgtgggaatgcctcggt
gatgcctacattgcaagaggcagctatatgccagcattgaaagcatttcagaaggctgtt
gagctcgaccctgagaatctatattccagatacaaaatgggcgtcatcaagcagtctgtt
tgcgtgtatgacgaagcaatcgaagaattcaagaaggtcttggcagttgaggaggatcac
ataccagcttggaggggcttggctgaatctcatctcaagacagagtatgcgtgtattgca
gagaacttcgatggcagagcggttgatcatgctgcggaggcgctactcgcagcggcaagg
gccatcgagcttcgaccagatcttcgctgcttgtggaaaattatgggtgacgcaagcttt
gccctccgtgttgttgctgaagagaaattaagaaatgattttcatagtctccaagttcct
ccatcggtttcgcaaatcattggcataaaagaagaggaaactggttcaaagaagaaattt
atcctggatttaagtcgtaggtgctatggagttgtggtcaaattggaagaaagctcagcc
gctgcgtggcatgatttgtcgctgagcagctttcattatggaatgcttcttgatggcgaa
cttggcaaaacgaccatgcaacagagcgtcaagttcatcaagaaagccatcagccttgaa
ccaggaaatgccaagatgtggaacacgttaggcgtgatctctggcagttcaggtccgtct
ctcacatgttgcggttactcggtttatgacattgccaaccccgagttaagccagcacgcc
ttcatcaaagcattgcaactggactctcagaatgcagaaatatggtgcaatttgggtact
ctttatctgaaatatgataaaatcaaggaggcccacgaagctttcaaaagagcccaggat
gcagacccggaatatacacctgcttggattggccaggcttcaattgcggaaatcattggc
gatgctgatgctatggatctttttcgccattcatctgaaatgggatcgcacactgagtgc
tatctggcatacgccaaatgggtaattttctccttaaaagactactttgccaagcaaaag
cggtctacgcaacgacttggccctttcgacttgcctgattttgtgcgcaaagccatcgcg
aattcggccgtctgtgtccagaagtatacagatcgcatgcctggaaactcttgtgcacac
aacctccttggtattctgctggaacaccaacagctgtttaagcaagccgaaacagcattc
agaagagcttatcaactacttgcaacgagtgaagatgtcaacaaaaggaacatggtacta
gcaaatctggccagagttttacgacgatctggccaattcaagcagtccattgaagtctac
cttcaaataaagccaatgatcaatgcaaatgacgtcactggcctcgcattggcctacttc
cttgatagtcagctggagcaaagtttccaaacctacgagcaagcactcggtttagcagag
agtgaacgggacaaatccgacattcttgccgccataggaattattggctattcaacaggg
aattctgagattgcgaagtcatttttgttcaagagcgcgcagacatcttctccaagtgaa
cgagggctttctgcgctggctgccttgggtctcttgtcaaaggatctgacgctaaccaat
gcagctttggcagagattagaaaacatcctgatttcgaaactgaggatgttcaagaaagt
tttacatttttggaatcatctctatatcacttacagggcaatttcacggaagctaaacgc
agcgttcagaaacttattcgaagatatcctggaagctcccggcagtgggctaaactcgcc
aaatttttctctttgcagacacctcttttgtctatggagattgctggccggtgtgcggaa
atttcagctgttcacgaaccatcaaatgtttcatcgctcgttgttgctgctgcagcctct
ggttcaaaatctttcgcttcaaagttagatagccaaagtccccatgttgcttgcttacgt
gctgctcaaaaagctgttcacagtaacccagggcaaccagagaactgggctctgctatct
gcggcggcattggcaaaaagtttgtgttctagcggtgttgcaaccagaacgatggcaatt
tcaacagcaagactttccttgcttaaagctgaggaaagcctcggcggattggaggagacc
ctaaagacaacgatttcacgccaacttgagcctaaaatcaaaattgccatcaacctcagg
gtgtattccatcaagcagctagtatgggcatatttgaacgacggcgtttacaatatcgct
atgttgttatcggaaaacgcgatgagtgagtacgaaggacatccaaaaatatggaacgat
cttcagtatctgaatgttatctgtgcaattctgttgaaatctagaaacggagaaaatgta
gatgaattgctattggctgcaaagacgctgtgcgattcggaaagcaattcgatttggagg
taccaggttttcgttggaatttgccaaaagctcggcctccctctgctcgccgagtttgcg
ctgcgaaaatgcatccaacacgccgtgcccggttctccttcaagccattcatcgtttgtc
cggctgtttttatcaagcatcgcttgctacagcaaagataaaaatgaaagatggatcaca
cttgcttcggaggcgttgaatgagtttgcaaaattaaaacctggaaattgcttggttgac
ttactcaggatgtcacttttccacgttcaaggagactcaaagaaagctgggaagatcttc
caaaggctgacttgtcagacagggggtacactggaagatctactcaaatcatggggaaag
ctttatggctcacagcaggaagagaaaatagatccattcgatgaagaatag
DBGET
integrated database retrieval system
