Rhopilema esculentum: 135688053
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Entry
135688053 CDS
T09994
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
res
Rhopilema esculentum
Pathway
res03022
Basal transcription factors
res03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135688053
09124 Replication and repair
03420 Nucleotide excision repair
135688053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
res03021
]
135688053
03400 DNA repair and recombination proteins [BR:
res03400
]
135688053
Transcription machinery [BR:
res03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
135688053
DNA repair and recombination proteins [BR:
res03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
135688053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
SurA_N
VWA
Motif
Other DBs
NCBI-GeneID:
135688053
NCBI-ProteinID:
XP_065060817
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MADDDKGEGAGGYRWLNEYEKTWEVLQEDDEGSLQATIDEIIQKAKRKRLLVRKGNVRLG
MMRHLFIVVDMSSSMKESDLLRPSRIACTQKLLEKFIVEYFDQNPISQLGIIITKNKRAE
KITDLSGNPKLHITALQNVVNKGCSGEPSLQNSLDTALAVLKHLPNHASREVLIIFGCLT
TCDPGDINDSIAALKSCDIRCSIIGLSAEIRICKQICKETQGEYGVILDEKHFQDLLVEK
VRPPEAKKSTAASLIRMGFPTHRSDGPLSLCSCHIDNQSECSLSTTGYFCPQCQSKYCEL
PMECRICGLTLVSAPHLAKSYQHLFPLRAFKELEAKAIQNLGNCKGCQRFHTDATVYECS
NCEQIFCMDCDLFIHETLHTCPGCQTGSKANLENDLANGSL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatgataaaggagaaggggctggaggatatagatggctaaatgaatatgaa
aaaacttgggaggttttacaggaagatgacgaggggtcacttcaagctacaattgatgaa
attattcaaaaagcaaaacgaaaaaggctgcttgtccgcaaaggaaatgtcagactgggg
atgatgagacatctattcattgttgtggacatgtctagctctatgaaagagagtgaccta
ttaagaccttcaagaattgcatgtactcaaaagcttctagagaaattcattgtcgaatat
tttgaccaaaatccaatctctcagcttggtatcataataacgaaaaacaagagagcagaa
aaaataacagatttgagcggaaacccaaaactacatataacagccttacagaatgttgta
aacaaaggttgttctggggaaccgtcattacaaaattcgttggacacagcactagcggtt
ttgaagcatcttccgaatcatgcaagccgtgaagttcttatcatatttggatgcctaaca
acctgtgatccaggggacataaatgattctattgcggcgttgaaaagttgcgatatacga
tgctcaattataggactgtctgctgaaatacgtatctgtaagcaaatttgcaaagaaaca
caaggcgaatatggagttattcttgatgaaaagcattttcaagatcttcttgtggagaaa
gttcgtccaccagaggccaagaaaagtactgcagcttccttaataagaatgggttttccc
acacacaggtcggatggtccactttcactttgctcttgccatattgacaatcagtccgaa
tgctccttgagcacaaccggatacttttgtccacagtgtcaaagcaagtattgtgagctg
ccaatggagtgtagaatatgtggcctaacgttagtgtctgctccacatctggcaaagtct
tatcaacatctgtttccattaagagcgttcaaagagctcgaagctaaggcaatacaaaat
ttaggaaattgtaaaggctgccaaagatttcatactgatgcaacagtttatgaatgttcc
aattgtgagcaaatattctgcatggactgtgatctatttattcatgaaactttgcacacc
tgcccaggatgtcagacaggctcaaaagcaaacttggaaaatgaccttgcaaatggatca
ttgtga
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