KEGG   Rhopilema esculentum: 135688235
Entry
135688235         CDS       T09994                                 
Name
(RefSeq) cleavage stimulation factor subunit 1-like isoform X1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
res  Rhopilema esculentum
Pathway
res03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:res00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    135688235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:res03019]
    135688235
Messenger RNA biogenesis [BR:res03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     135688235
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd CSTF1_dimer Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_Aladin Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_IFT122_1st DUF7165 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 135688235
NCBI-ProteinID: XP_065061062
LinkDB
Position
Unknown
AA seq 433 aa
MVESLREREVLYKLIISQLRYDGLDMVAANLAKCVGLETTPLSPSSRLLGLMKLGLQEEK
NGIVPDMETPPGLVPPIPPARGLDLEYETEDYGTSPPMSQYETHYVTAHKGPCTAAAFSH
DGRLITTGSNDASIKIIDVDRMLAKAAQSQAERQAEKESDEGAGMKNHPVMRTMYDHDST
ITFLEFHPTIPILASGSEDRTVKLFDFSKSSAKKAYKTIEEAETIRGISFHPAGDHILIA
TDSPTVRLYDLKTFQCYVSNNPRDQHTGALTCVKYTPGAHLYATSSKDGSFKIWDGVSNR
CVNTFKAAHGGAEVTAVRFTKNSKYVLTSGKDSCSRLWELTTGRAINIYVGSNLHQGCYS
PSIFNHTEDYVVFPDDKSMSIGCWDSRTTEKLQSLHSGHNNFIRYLVHSPVESAMMSCSE
DYRARFWYCKGSG
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggtggaatctttgcgagagcgggaagtgctttataaactcataataagccagttacga
tatgatggccttgatatggtagctgcaaatttagcaaagtgtgttggactggaaacaact
cccctttctccatcatcaaggctccttggactaatgaagctaggtcttcaggaagaaaag
aatggaattgttcctgatatggaaacacctcctggattagtaccaccaattccaccagca
agaggactggatctagagtatgaaacagaagattacggcaccagtccaccaatgagtcag
tatgaaacgcattatgtaactgctcataagggaccctgcacagcagctgccttttctcac
gatggtcgattgataacaacaggctccaacgatgcttctatcaagattatcgatgtggat
agaatgttggcaaaggctgcacagagtcaagcggaaagacaagcggagaaagaaagcgac
gaaggagcaggcatgaagaaccacccggtcatgagaacgatgtacgatcatgattcgacg
atcactttcttggaatttcatcctaccattcccatattggcatctggaagcgaagacagg
acggtgaaattgtttgatttttcaaaatcgtccgctaaaaaagcctacaaaacgattgag
gaagctgaaacgatccgtggtatttcctttcacccggccggggatcacatacttatagcc
acggatagtccaacagtgcgtctttatgatctgaagacattccaatgctatgtttcaaac
aacccgagggatcagcatactggtgcattgacgtgtgtgaaatacacccctggcgcgcat
ctttatgcaactagtagcaaagacggctcgtttaagatttgggatggtgtaagcaatcgt
tgtgtgaacacttttaaagcagctcacggtggcgctgaggtaacggctgtgcgcttcaca
aaaaattccaagtatgttttaacaagtggaaaggactcttgctctagactctgggaattg
actacaggtcgtgctattaacatttatgttggatctaatttgcatcaaggctgttattca
ccatcgatattcaaccatacagaagattatgtggtctttcctgatgacaaaagcatgtca
attgggtgttgggatagcagaacgaccgagaaattacagagtcttcactcaggccataac
aatttcatccggtacttggtgcattctcctgtcgagtcagcaatgatgtcttgcagtgaa
gattaccgggcgaggttttggtattgcaaaggctctggctga

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