KEGG   Rhopilema esculentum: 135688242
Entry
135688242         CDS       T09994                                 
Name
(RefSeq) DNA ligase 3-like isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
res  Rhopilema esculentum
Pathway
res03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:res00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    135688242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:res03400]
    135688242
Enzymes [BR:res01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     135688242
DNA repair and recombination proteins [BR:res03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     135688242
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT DNA_ligase_A_C zf-CCHH RNA_ligase BRCT_2 mRNA_cap_enzyme BRCT
Other DBs
NCBI-GeneID: 135688242
NCBI-ProteinID: XP_065061078
LinkDB
Position
Unknown
AA seq 790 aa
MADNNGISFEEFWKLCKRLANEPSYNMKTEIIKQFVEQKASKDASQDQLFVLVKMLLPGV
HKRVYNLKDKQIVKLFSQVFNINCEEMVKDLEKGDASKTVKDFFKRSNGVIPCKTSSLSL
IEVDELLDQLVSLTKEDEQYPILKKISKRCTTEDLKFIVRLIKHDLRMNTGVKHVLHALD
KNAYAAYQACSNLQDVVEKLSKRKIADMPGLQKSLSIKASLMTPVKPMLAEACKSTTFAM
KKCPNGMLAEIKYDGERVQVHKKGNSFDYFSRSFKPVQPHKVSEIKHFLPKACPEGDNLI
LDGEVLLVDSKTEKPLPFGTLGIHKKSKFKDATVCYVIFDILQFNEDNTMKRSVLERRDL
LMKNVKEIKGRIMLSEMTRITRESELKAMLEDVFAKNLEGLVLKDLKSTYEPGKRHWLKM
KKDYLHEGAIADTADLVVLGAYFGTGNKGGMMSVFLMGCYNPAGKKWVTVAKCGNGHDDS
TILRLQKELKVKKISKEYSKIPSWLEISKQLVPDFVVEDPKTAPVWEITGAEFSQSSTHT
ANGISIRFPRVTRIRDDKDWETATDLPTLQKLYENSKAVSEDQSRPGTSKAVEIKADDAV
YIDRKDRQKDPGYTKGDTKVKRIYKRAFNDDSDEDKSPPPKKKVKPLCKYKEKCYQKSKK
HLEEYSHPEKPLSSLAESSLAESSMAESSMASSNPSRLSSQKNLPAIFSSTQVFISDDIS
SFNKLKRYIIAYDGDIVDEFHLEKATHYITNSQVSISSHTSAILVNEDWVWDSVRIAVLQ
DESNYFPGSI
NT seq 2373 nt   +upstreamnt  +downstreamnt
atggccgacaacaacggaatttcgtttgaagaattctggaagttgtgtaaaagactcgcg
aatgaaccgagttataatatgaaaacagaaatcataaaacaatttgtggagcaaaaggct
agtaaagatgcatcacaagatcaactttttgtgctagtgaagatgcttcttccaggtgtt
cacaaaagagtttacaacctcaaagacaagcaaattgtcaaactgttctcccaggtgttt
aatatcaactgtgaggagatggtaaaggacctagaaaagggtgatgcttcaaaaactgta
aaggacttcttcaaaaggagcaatggcgtcataccctgcaaaaccagttccctatcactc
attgaggtcgatgaactactagatcagcttgtttccttaacaaaggaagatgaacaatat
ccgatattaaagaagatttccaaaaggtgcacaacggaagatttaaagttcatcgtgcgc
ttgataaaacacgatctcagaatgaacactggggtaaaacatgtgctccatgcgttggat
aagaatgcctatgccgcttaccaggcttgcagcaatttacaagatgttgttgagaaactt
agcaaaagaaaaatagctgatatgcctggtttgcaaaaatctttaagtatcaaggcttca
ctgatgacacctgtcaaaccaatgctggctgaggcatgcaaatcgacgacgtttgcgatg
aagaagtgtccaaatggaatgttggcggaaatcaagtacgatggagaacgtgtgcaggtc
cataaaaaagggaacagtttcgactatttcagccgcagttttaaaccagttcaacctcac
aaggtgtcagaaatcaagcactttttgccaaaagcctgtccagaaggagataatcttatt
ttagatggtgaggttcttctggttgatagcaagaccgaaaagccgcttccatttggaaca
cttggaattcacaaaaaatcaaaattcaaagatgctaccgtgtgttacgtcattttcgat
atcctgcagttcaatgaagataatacaatgaaaaggtcggttttggagagaagagatctt
ttgatgaaaaacgttaaagaaattaaagggcggatcatgctttcagagatgactcgaata
acgcgagaatcagaactgaaagccatgcttgaggatgtttttgctaaaaatcttgaaggt
cttgttctcaaagatctaaagagcacctatgagccagggaaaagacattggctaaagatg
aaaaaagattatttgcacgaaggagccattgctgatactgcagatctcgttgttcttggt
gcttactttggaacaggaaataaaggtggcatgatgtcagtattcttaatggggtgctac
aaccctgctggtaagaaatgggtcactgttgcaaaatgcggaaatgggcatgatgatagt
accattctgcgcttacagaaggagctaaaagtgaagaaaattagtaaggaatattctaaa
ataccatcttggctcgaaatttccaaacagcttgttccagattttgtcgttgaagatcca
aagactgccccagtgtgggaaatcacaggagcagaatttagccagtcaagtacacataca
gccaatggaatatctattcgatttccacgtgtgacaaggattagagacgacaaggattgg
gaaacagccacggatctgccaacacttcagaaattgtacgaaaactcaaaagctgtttca
gaagatcagtcaaggccaggaactagcaaggctgtggagataaaagcagatgatgctgta
tatattgatcggaaagatcgccaaaaggatcctggatataccaagggagatactaaggta
aagcggatatataaaagggccttcaatgatgacagcgatgaagacaaaagccctccccca
aagaagaaggtcaaacctctgtgcaaatacaaagaaaagtgttatcaaaaaagcaagaag
cacctcgaggaatattcacaccctgagaaacccttgagctcattggctgagagctcattg
gctgagagctcaatggctgagagctcaatggcttcatcaaatccatccagactatcgtca
cagaaaaatttgccagccatattctccagtacccaggttttcatatcagatgatatatca
tcgttcaacaaattgaaaagatatattattgcatatgacggtgacatagtcgatgagttt
catttggaaaaagcaactcattatataacaaacagccaggtcagcatttcatcacatact
agtgcaatacttgtaaacgaggattgggtttgggattcagtaaggattgccgttttgcag
gacgaatcaaattatttccctgggtccatatag

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