Rhopilema esculentum: 135688422
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Entry
135688422 CDS
T09994
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
res
Rhopilema esculentum
Pathway
res04120
Ubiquitin mediated proteolysis
res04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135688422
04120 Ubiquitin mediated proteolysis
135688422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
res04121
]
135688422
Enzymes [BR:
res01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135688422
Ubiquitin system [BR:
res04121
]
Ubiquitin ligases (E3)
U-box type E3
135688422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
ISP3_C
Motif
Other DBs
NCBI-GeneID:
135688422
NCBI-ProteinID:
XP_065061334
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MSELSQEEVRRRRLERFTNSNASPTTSQTDEQSSPSTSTLPQPTIDVASARKRVANSPKT
YGGSTPSSAAILYDTTPPSFSSADSGIATQSMEIDSPDPDKGEKRTSQFMLTPPSDGKFK
KQHTVKKVLEKDLVPMQWDFYSVSLCKIFDVSLKPPIVDLNPGHLLHIVPQIYSPDGKAQ
EFDFKDVMQQILMEQHLSGSYKEIPADIPSPDRGMESNPAMLISESLTQLSSRNNMAALA
TEDMVEKSPVTQKISVASMLETGTCDEVFLKKEIRYIINCYDRVGTEERSFPKRSNDPKW
KELLQTACGACISQALFVLSGDFEDSEMIIPRRSGNRSPLLFLPFLLEEREAFPRGFLAD
LVQMAHSNGCLDRIFSPLLMELYERMKNTSLVDEAYKAPLLALSELSEIRLPLSIRPICS
LLSKLPSWNPEPMSNAAAKELESLSYLGPFLQLSIFAEDNSQVADKYFADGKPGQDHIGL
IHTTLRVGMQLLRSELFKIVYNNLLNQESREACLQYIANILNRNNKKSQLQADDKLLSKD
GLLINLLSVLQQLCIKVRLDKVDHLYPFHPKCKLDMSQSSPIRATKDEVDKWKKSFDNKA
WGEVKFLTECFFFTFHCHHLSIIPCIRKFAKRIRALRDMNRLVNELESRDSEWKNTPLAA
RNRALLKKWKLQIKKLVKEDACAEVVIMDEDLLRQCLRFYGTASQWLLGLATGKEMSSLS
LPLPETVPTHFGAMPDYFIEDIAEFLLFVDIHAPQVLDDPCIEDFMPFLVVLLCNYNYIA
NPYLAAQLIEVIFAVDPSVQARAKPFYDAIVSYPIGELHLAPALMKFYVYVETTGSSNEF
YDKFGIRYHISVIMKGLWKRPMHKASIKQESRTPNFVRFINMLINDLTFLLDESLDTLKN
IHEHQELIANAAEWEALSRELRTSRQRQLATDERQCRSYLTLASETLGMLHYLTKEIPEP
FLEKVLSERLAVMLNFNVKQLTGAKCKNLKVRNPEKYGFEPKKTLDKLTDIYLHLDGDEF
ADAVAADERSYSKEAFDDCLFLLKRTLLKPESEIEKFKRFADKVEEIFVENNKAAMDLDD
APDEFRDPLMDTVMENPVRLPSGIIMDRHIITRHLLNSSTDPFNRQSLTVDMLVPEPDLK
QKIEDWLRSKRKK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattgtcacaagaagaggttcgaagaaggcgtctagaacgttttaccaacagt
aatgcatcaccaacaacatcacaaacagatgaacagtcatctcccagtacatcaacattg
cctcagccaaccattgatgttgctagtgctagaaagcgagttgccaacagccccaaaacg
tatggtggatctaccccctcatcagcagctatcttatatgacacaacaccaccaagcttt
tcatctgctgatagtggaattgccacacagtcaatggagattgacagcccagatccagac
aagggcgaaaagcgaacatctcaatttatgctcactccaccctctgatggaaagttcaaa
aaacaacacactgtcaagaaagttttggaaaaggatttggttcctatgcagtgggatttc
tattctgtgtccttgtgtaaaatttttgatgtctcattgaagccaccaattgttgattta
aatccaggccacttgttgcatattgttcctcaaatatattctcctgatggcaaagcacaa
gagtttgatttcaaagatgtgatgcagcagattttgatggaacagcacctttctgggtcc
tacaaggaaataccagctgatattccgtcaccagacagaggtatggaatcgaatccagca
atgctgatatcagagtcactcacccagctttcgtcacgtaacaacatggcggcattggcg
acagaagatatggttgagaagtcacctgttacacagaaaatatcagttgcttcaatgctg
gagactggtacatgcgatgaagtatttctgaaaaaagagatacgatatataatcaactgt
tatgatcgagttggaactgaagaaaggtcttttccaaagcgttcaaacgaccccaaatgg
aaagagttgcttcaaactgcctgtggtgcttgtatttcacaagctttattcgtacttagt
ggcgattttgaagattcagagatgattattcctcgtagaagtggcaaccgttctcctctc
cttttcttgccatttctgttggaagaacgagaagcatttccacgtggctttctggccgat
ttagttcaaatggcgcattcaaatggctgtcttgataggatattttcaccactgctaatg
gaactatatgagcgaatgaagaacacgtcactggttgacgaggcatacaaggctccctta
ttggcactttcagaactatcagaaatcaggttgccgttatcaattaggcccatctgctcc
ttgctttcaaaacttccgtcctggaacccagaacccatgtccaatgcagcagctaaagaa
ctcgagagtctttcttatttgggacctttccttcagctctctatatttgcagaggataat
tcacaagttgccgataaatattttgctgatggaaaaccaggacaagaccatataggacta
atacacacaacgctgagagtaggcatgcagttattgcgatcagaactgttcaaaatcgtg
tacaataacttgctgaatcaagagagcagagaggcttgtttgcaatatattgccaacatt
ttgaatagaaacaacaagaagtcgcagcttcaggcggatgacaagctgctatcaaaggat
ggacttctaataaatctgctttcagttcttcagcagctttgtataaaagttagacttgat
aaggttgatcatctttacccttttcatccaaaatgcaaacttgacatgtcacagtcttct
ccaatcagagccacaaaggatgaagttgataagtggaagaaaagttttgataacaaagca
tggggtgaagtgaaatttctaaccgaatgcttctttttcaccttccattgccatcaccta
tctatcattccttgcatacgaaaatttgccaagcgaatacgagcattgagggatatgaat
cgactggtgaacgagcttgaatcacgtgactctgagtggaaaaacacaccactagctgct
cgtaacagagcattgctgaagaaatggaagttacaaataaagaaactcgtaaaagaagat
gcttgtgctgaagtagtcatcatggacgaagatctgctaagacaatgcttaaggttttac
ggcacagcttcacagtggcttcttggtttagcgactgggaaagaaatgtcgagcctatcg
ctccctttacccgaaactgttccaacgcattttggtgcaatgccggattacttcattgaa
gatattgcagagttccttctgtttgttgacatacatgcgccgcaggttcttgatgaccca
tgcatcgaagatttcatgcctttcctcgttgtgttgttatgcaattacaactatattgcc
aacccatacctagccgcgcagttgatagaagttatttttgccgtggaccccagtgtccag
gcacgtgccaagcccttctacgatgctattgtttcttacccaattggagagctgcatttg
gcaccggctttaatgaaattctacgtttacgtggagacaactggatcttcgaacgaattt
tatgacaagtttggtattcgctatcatatttctgtgataatgaaaggcctttggaagagg
ccaatgcacaaggcttcaatcaagcaagaaagcaggacaccgaattttgtccgttttata
aatatgttgatcaacgacctcaccttcttgctggacgaatcattggataccctgaagaac
atccacgaacatcaagagcttattgcaaatgctgctgaatgggaagccttgtctcgagaa
ttgagaacctcccgtcaacgtcaactggctacagatgaacggcaatgcaggtcatacctc
actcttgcatcagaaacccttggaatgctgcactacctgacaaaagaaataccggaacca
tttcttgaaaaggtcttgtcagaaagactggctgttatgctgaatttcaacgtgaagcag
cttaccggtgccaagtgtaagaatttaaaggtacgaaatccagaaaagtatgggtttgag
ccaaagaaaacgcttgacaagcttacagatatatacctgcatcttgatggagatgaattt
gcagatgctgttgctgctgatgagcggtcatacagcaaggaagcttttgacgattgtctg
tttttattaaaaagaaccctccttaaacctgaaagtgaaattgagaaattcaaaagattt
gctgacaaggtagaagaaatatttgtagagaataacaaagcagccatggatctggatgat
gctcctgatgaattcagagatccactcatggacactgtgatggaaaacccagtgcgccta
ccaagcggcatcattatggatcgccatatcatcactagacaccttctcaactcttctact
gatccttttaaccgccaaagtcttactgtagatatgctagttccagagcctgacctcaag
cagaagattgaagactggcttcgttctaaaagaaaaaagtaa
DBGET
integrated database retrieval system
