Rhopilema esculentum: 135688515
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Entry
135688515 CDS
T09994
Name
(RefSeq) exosome complex component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
res
Rhopilema esculentum
Pathway
res03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135688515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135688515
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
135688515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
135688515
NCBI-ProteinID:
XP_065061459
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MAEQKEDIFGFESLQEFSQTWLKNLVMCTKASNEMIKSHDDHEFWTGFEQYQDFCASTGT
SVLKMIGDILRHQGVQCRWSQSVSKHYPHNDIDDRFDSIVEANDILLERIDTQLDEIINP
SNSKKILPSATTPVNVSIDSSWNKRSNEKKLKHDRWRKFNLITARNIERPQLKWKRKVDN
SNAPFVPILKQKPNAIKEWRPSQRFEEDGRESKVMSTVDDFIHSQRLGEDFDMFEDRHPY
RFELESFEPVPWQLEKGAIEPYKGIEKTSLTVIDDVEKLNGLLEKLKAVKEVAIDLEHHS
YRSFMGFCCLMQISTREEDFIVDTIVLREDLQVLNEVFTNPGILKVMHGADQDIEWLQRD
FGLYIVNMFDTGQAARILQLARFSLAFLLKEYCDIAADKQYQLADWRLRPLPDEMVKYAR
EDTHYLLYIYDKLRDILFEKAEGQSSLMKAVYQMSKKICLKVYEKPIFTPDAYMDICTKY
KKKLNDQQLECLRLLVAWRDRTAREEDESYGYVIPNHMMLRIAEQLPREPEGVLACCNPI
PPLVRQRVAEIYNLVKEARIFNAKKLSGSSNTKPSEDTSQPKRKEKDDSFVETLEGSDYY
SSAQTGFEIYTPSGPSVKKLTVATLFHDEPDKKEKTDNERKARFILESFRSPFELYLPKE
RNSTDPAEINKKWKQSTVTFLEQNKEAETETAGAGPSSEDNAPKRKSQEESTNSSQKTLR
DELVKKQKKGALSEDPNSGSESPVLFSYEKAATGPAFVPFDYSKAGKIKTEPGSSNDVTK
EQLGNIVEAPLKKGDVRAKKRFQRGGGKSMSYKR
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagaaagaagatatttttggttttgaatcattacaagaattttcccagaca
tggctaaaaaatcttgttatgtgcaccaaggcatcaaatgaaatgataaaatctcatgat
gatcatgaattttggactggttttgagcagtatcaagacttttgtgcaagtacagggaca
agtgtgctaaaaatgataggagatattctgcgtcaccaaggagtccaatgcagatggtcc
caatcagtgtctaaacattatcctcacaatgatattgatgatagatttgatagcattgtt
gaggctaatgatattcttttggaaagaattgacacccagcttgatgaaatcatcaacccc
agcaattcaaagaagattctaccatcagcaacaacaccagttaatgtttctattgactcc
agctggaataagcgatctaacgagaaaaaactgaagcatgatcgctggaggaagtttaat
ctaataacagcccggaatattgagcgaccgcagctaaaatggaaaaggaaagttgacaac
agcaatgctccctttgtcccaattctcaaacagaaaccaaacgcaataaaggaatggagg
ccgtctcaaagatttgaagaagatggtcgagagtcgaaggtgatgtctactgttgatgat
ttcattcacagtcagaggcttggggaggattttgacatgtttgaagatagacatccatac
agatttgaactagagtcttttgagcctgtgccatggcagttagaaaaaggagcaatagag
ccctacaaaggtattgaaaaaacatcgttgactgttattgatgacgtcgaaaagctaaat
ggtctgcttgagaaattgaaagctgtaaaagaagtagcaatcgacttggagcatcattcg
taccggtctttcatgggtttctgttgcttgatgcagatttcgacgcgggaagaagacttt
attgtagatactattgttttgagggaagacctccaagttttaaatgaagtttttacaaat
cctggcattttaaaggttatgcatggtgcagatcaagacattgaatggcttcagcgtgac
tttggtttgtacatagtaaacatgtttgatactgggcaggcagctagaatcctgcaactg
gcccgtttctcccttgcctttcttctgaaagagtactgtgatattgctgccgataaacaa
taccagcttgccgattggagattgaggcccttaccagatgagatggtaaaatatgctcgt
gaggatacacactatctgctgtacatttatgataaactgagagatattctcttcgaaaaa
gcagaagggcagtcatctttaatgaaagccgtgtatcagatgagcaaaaaaatatgctta
aaggtctacgagaagcccatattcactcctgatgcatatatggatatttgcaccaagtac
aaaaagaaactcaacgaccagcaactagagtgtttaagacttctggttgcctggagagat
agaacagcaagagaagaagatgaaagttatgggtacgtcatacccaatcacatgatgctg
cgtattgctgagcagttgccaagggaacccgaaggagtccttgcatgttgcaatcctata
cctccactggtcagacagcgagtagctgagatttataatctggtaaaagaggcacgaatt
ttcaacgctaaaaagctttcaggaagttctaacacaaaaccatcggaagatacatcacaa
cccaagcgaaaggaaaaagatgactcgttcgttgaaacactagaaggaagtgactactac
tcttctgcccaaactggcttcgaaatttacactccgagtggaccatccgtcaagaagtta
accgtggccaccctgtttcatgacgaacccgataaaaaagagaaaacagataatgaaaga
aaggcacggtttatcttagagtcattcagaagcccgtttgagttgtatttacccaaggaa
aggaattccacagatccagcagagattaataaaaaatggaaacaatctactgtcacattt
ttggaacaaaacaaagaggcagagacagagacagccggtgcagggccaagttctgaagac
aatgcccctaaaagaaaatcacaagaagaatctaccaacagttcacagaagactctaaga
gatgagcttgttaagaagcagaaaaagggtgccttgtcggaagacccaaacagtggatca
gagtcacctgttttgttctcttatgaaaaagcagcaactggccctgcatttgtcccattt
gactactcaaaagcagggaaaataaagacagaacctggctcttcaaatgatgtcacaaag
gagcagttagggaatattgtcgaagcaccgttaaaaaagggtgacgtccgtgccaaaaaa
agatttcagagaggcggaggaaagtcaatgtcatacaaaagatag
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