Rhopilema esculentum: 135689791
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Entry
135689791 CDS
T09994
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
res
Rhopilema esculentum
Pathway
res03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135689791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
res03400
]
135689791
DNA repair and recombination proteins [BR:
res03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
135689791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
135689791
NCBI-ProteinID:
XP_065063209
LinkDB
All DBs
Position
Unknown
AA seq
1344 aa
AA seq
DB search
MATLFSYFTKSPKVGATAGKKSNASPKEQAKELKEKNGSTPIGPKSPVFNVQSHGEGEIV
WAKMEGHPWWPSMICKHPSTSKLEKKVGKFIELHVQFFGTPPSRGWIKKRDLQGINDRKP
DDNEEVKSAYKEALEAVKLKSNERIEKLYACASSDEEMDENDEEDGKISFEIGNSVENNG
EVIMSADEEDDVNQKVPKSEKRKRTRRDNEKEQRKKAKRVIESGSESEDEYKPDGEESSD
DGASSGVNEDELSGVEAEEISDDEEDGGSKTKKKLAASKSFLTPIRSKKNGKENLNNTGT
PKSTSPLMEKVASSVNRAQTALAKFSAEPSSPAPDIGTGEVRTFDHEKLQFLKDGHRKDK
NGKLHTDPNYDKKTLLIPDSFLKSKEVTPALRQWWYLKRDLYDTILFFKLGKFYELYHMD
AVVGVKELGLLFMRGKAAHCGFPEIAFSRYSDILVQRGYKVARVEQTETPQMMNERCAKK
AGTPKVVARELVAVTSKGTKTYSYMEGQAVDSESSFLFAFCEKNDGGSESTFGVCFLDTS
IGKFHIGQFKDDRQSSRFRTLLSHYPPAEVLYERGGLSTKTQSILQHELVSTLKEALVPG
TEFWDSGKTLKQLAEHNWFDDSLSSENSTKSWPPVIKKMLSNADTLGLTASDEYSLAISA
LGACTWYLKKCLIEEELLSMGQFEEYIPVDNLSPSSEVSSFPEKRQKLILDGVTLANLDI
VCNGDGGIEGSLLEQLDHCSTPFGKRLLKQWLCAPLCHPDGINARLDAVEELMGKSSLME
KAGEIMRTIPDLERILRRIHAMGSLKKSKIHPESRQILFNNDVYNKRKIGDLLSALEGLE
KASKVVALFQSDDEPLKSSLLQQIVSKQEGRSSKGFPDLSEFLDFFKNAFDHNKAKKDGV
ILPKKGVHEEYDRALEDINAVERDLDDYLEKQRKRLGCRAITYWGNGKFRYQLEVPEKNL
ARNTPDDYHLKSQRKGYKRFRTDYIEEKLLELCDAEDRRDSALKDTMRNVFHIFDEKYKS
MEGALQCISVLDCLMSLAIYSSNADGVTCRPEILLTSTHEGNENVTPFIEIRNSRHPCIS
RTFTGDDFIPNDINVGKMQGDEGEANSDSTCLLVTGPNMGGKSTLMRQTGIIIIMAQLGC
YVPAEMCRFTPVDRVFTRLGAHDRILHGESTFFVELSETATILQHSTRNSLVLLDELGRG
TATFDGTAIASAVVRELAHSIKCRTLFSTHYHSLVDEFSDDPSITLGHMACMVENDDENS
SGDPSTETITFLYKLASGPCPKSYGFNAARLAGLPIEIIKCAYLKARMLEDVTMKSRIFR
SVVSQNHQIDEKLVAEIRKHIERA
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggctacgttgttttcatattttacgaaatcaccgaaagttggagcaacagctgggaaa
aagtcaaatgcatcccctaaagagcaagcaaaagaattgaaagagaagaatggctcaaca
cctatcggaccgaaatctccggtttttaatgtgcaatctcatggagagggagaaatcgtt
tgggcgaaaatggaaggtcatccctggtggccaagtatgatatgcaaacatccgagcact
agtaagcttgaaaagaaggttggaaagttcattgaactccacgtacagttttttggtaca
cctccaagcaggggatggataaagaaaagggacttgcaaggaatcaatgataggaaacct
gatgacaatgaggaggtgaaaagtgcatacaaagaagcattagaggcagtgaaattaaag
tctaatgaaaggattgaaaagctgtatgcatgtgcatcatctgatgaggaaatggatgag
aatgacgaggaggatggaaaaatttcatttgaaatagggaactctgtggaaaataatggc
gaggttatcatgtcagcagatgaagaggatgatgtcaatcaaaaagtgcctaaaagtgaa
aagagaaaaagaaccagacgagataatgaaaaagaacagagaaaaaaggcaaagagagtt
attgaatctggatctgaatctgaagatgaatataaaccagatggagaggaaagctcagat
gatggtgccagtagtggggtaaatgaagatgagttgagtggtgttgaagctgaagagatt
tcagatgatgaggaggatggtggttcaaagacaaagaaaaagttagcagcttcaaagagt
tttctaacacctattagaagtaagaaaaatggtaaagaaaatcttaacaataccgggaca
ccaaaatctacttccccattaatggaaaaagttgcaagctcagtcaacagagcacagact
gctctagcaaagttttcagcagagccatcaagtccagctcccgatattggcactggagaa
gtgaggacatttgatcatgagaaattacagtttttaaaggatgggcatagaaaagacaag
aatggaaagttgcataccgatccaaattatgacaaaaaaacactccttattccagattca
tttttgaaatcaaaggaagtgactccagctctcagacagtggtggtatttgaaacgtgat
ttatacgacaccatattattctttaagcttggtaagttttacgaactgtaccacatggat
gctgttgttggtgtcaaagagttgggtcttcttttcatgagggggaaagcagctcattgt
ggcttcccagaaattgctttctcgagatactcagacattctggttcaacgtggttacaaa
gtcgcaagggttgagcaaacagagaccccacaaatgatgaacgaaagatgtgccaagaaa
gcggggacaccaaaagttgttgccagggaactagtggcagtaacatcaaaaggcacaaag
acttacagttacatggaggggcaagctgtcgattcagagtcttcttttctatttgccttc
tgcgaaaagaatgatggtggatcggaaagtacatttggtgtctgcttcttggatacgtca
attgggaaatttcacattggccagtttaaagatgaccggcagtcatcaagattcagaact
ttgctatctcattacccccctgccgaggtcttgtatgaaaggggtggcctaagcaccaag
acccaaagcattttgcaacacgaactggtttccactttgaaagaagcgttagttccaggg
acagaattttgggattctggaaagacattaaaacaactcgctgaacataattggttcgat
gattctttgtcaagcgaaaactcaaccaagtcttggccgccagttatcaagaaaatgttg
tcaaatgctgacactctggggctgactgcatctgatgagtacagtttggcaatcagtgct
cttggagcttgcacctggtacttgaaaaagtgcttgatcgaagaagagttgttgtcaatg
ggccagtttgaggaatacatacccgtggacaatctttcaccatcgagcgaagttagttct
ttccccgaaaaaagacagaaattgattcttgatggagtcacgcttgccaatcttgatata
gtttgtaatggagacgggggaatagagggatctttgctggaacagcttgatcactgtagc
acaccgtttggaaaacgcttgctgaagcagtggctctgcgcgccactttgtcatccagat
ggtatcaatgccaggcttgatgcggtcgaagaactaatgggcaaatcaagtttgatggag
aaagctggtgaaatcatgcggacaattccagaccttgaaagaatcttgagaagaattcat
gcgatggggtcattaaagaaaagcaaaattcatcctgaaagcagacaaattcttttcaat
aatgacgtctacaacaagcgaaagattggtgatctgctttctgctttagagggattggag
aaggccagcaaggttgttgcattgtttcaatcagatgatgagccactgaaatccagtctg
ctccagcaaatcgtcagcaagcaagaagggcggtcatccaaaggtttccctgatttgtcc
gaatttttagactttttcaaaaatgcatttgatcacaacaaagcaaagaaggatggcgtc
atcctgccaaagaaaggtgtacacgaagaatatgaccgagcactggaagacatcaacgca
gtcgaaagagatctggatgattatttagagaagcaaaggaaaagacttggctgtcgggca
attacatattggggaaatggtaaattccgctaccagctggaagttcctgaaaaaaatttg
gcacgaaataccccggatgattatcatttgaaatcgcaaagaaagggatacaaacgattt
cgaactgattacattgaagaaaagcttttggagctttgtgatgcagaagataggagggat
agtgctctgaaggatacaatgagaaatgtcttccatattttcgacgaaaaatataaatcg
atggaaggtgctcttcagtgcatatctgtgcttgactgcctaatgagcctagcaatatat
agttccaatgcagatggtgttacctgccggccagaaatacttctgacgtcaactcatgaa
ggcaacgaaaatgtgacgcctttcatcgaaatccgcaactctcgtcacccctgcattagc
cgtactttcactggtgacgacttcataccaaacgacatcaatgtcggaaaaatgcaggga
gacgagggcgaagctaactccgacagcacttgccttcttgtaactggtccgaacatgggt
ggaaaatcgaccttgatgcgtcagactggtattattatcataatggcacaactaggatgc
tacgttccggctgagatgtgcagattcacaccagttgatcgtgtatttaccaggctggga
gctcatgatcgtattctacacggcgaaagcacgttctttgtagaacttagcgaaacagcc
acaatcctgcaacacagcacaagaaattcattggtcctcctagatgagcttggccgtgga
actgcaacatttgatggaacagcaattgcatcagctgttgttcgtgaattagcacacagc
ataaaatgcagaacacttttttcgacacattatcattcactggtcgacgaatttagcgac
gacccgagtatcaccctaggccatatggcgtgcatggttgaaaatgatgatgaaaacagt
tctggcgatccaagcaccgaaacaataacctttttgtacaagcttgccagtggaccatgc
cctaagagttatggtttcaacgcggctcgacttgctggattgccaatcgagattataaaa
tgtgcctatctaaaagctcggatgctagaggatgttactatgaagtctcgtattttcagg
tctgttgtttcgcaaaaccatcaaatcgatgaaaagctggtagctgaaattagaaagcac
atcgaaagagcatga
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