Rhopilema esculentum: 135690128
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Entry
135690128 CDS
T09994
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
res
Rhopilema esculentum
Pathway
res03030
DNA replication
res03410
Base excision repair
res03420
Nucleotide excision repair
res03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135690128
03410 Base excision repair
135690128
03420 Nucleotide excision repair
135690128
03430 Mismatch repair
135690128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
res03032
]
135690128
03400 DNA repair and recombination proteins [BR:
res03400
]
135690128
DNA replication proteins [BR:
res03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135690128
DNA repair and recombination proteins [BR:
res03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135690128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
AAA
BRCT
Rad17
RuvB_N
AAA_22
AAA_16
nSTAND3
PTCB-BRCT
BRCT_2
AAA_30
AAA_14
AAA_5
AAA_18
AAA_7
AAA_33
RNA_helicase
AAA_17
NACHT
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
135690128
NCBI-ProteinID:
XP_065063673
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MDIRSFFSPGFKAKSSSSSDEKGKGSSKAKASASNQLASKRKKTSKKRALDSDSDEEPLP
QKLRKTTSTKTVIVESDDEDLAIVKKSKNVKDSTPKKGDKRKWKNEEKVAKPKEVLKPTN
ADDFFGSTPVAQKTKTSLLSKARTQKDSSQTKASEGSTGKKKESQKIDDEFMEIIDDDDD
DFEKSIQELESCDKSNKKEKQRTSLEKPKFINESPIPKKTGGGKKVNEKGPKKDEEREPL
KKTSPMKPSPTKAKQVRSGGNKKEEESKKTPEKPKEASEEKKKQEATPVEKKKSFYAYKA
REGPRNLGAKELPQGADNCLEGLSFVITGILESIEREQAVDLVKRHGGKVVSAVSKKTSY
LVVGRDPGESKISKASNFGTKQLDEDKFFDLIRQMPGKVSKYEPPQEKKKNEPYKSPSTT
ITSESKYFKSDEKTHVESNTSLQQDHSKKADTREQSQSSQLSQSSQPSQSTQSSQDISQQ
KAETLLWVDKYKPKVMKNIVGQHGDKSNAKKLLNWLLKWADNNQGGAKPKGKGGFFAGKE
DGSIFKCALLSGPPGVGKTTTATIVCQEAGYSFMEMNASDTRSKKTLQQYITEVLSNKTM
DHSLSGKRETVTGRHALIMDEVDGMAGNEDRGGVQELIGLIKGTKIPIICMCNDRNHPKI
RSLANYCFDLRFYKPRIEQIKGFAMSVSCKEGLRIPPPVMEQIIVGANQDIRQVLHNLQM
WSSTKKSMTYDEAKNEAQKSHKNIKIGPFDITKRLFSASDSQNMSLQDKLSLFFEDYSFV
PLFIQENYLLSNPLQARGSKRKVLDLMSSAADFIADSNLVEKKIREAQAWSLLPLQGFFS
CVAAPDMMRGGLGQRINFPQWLGKNSSQGKHDRILQELKVHTRLSCLAGKSDLNMDYLWL
MKKKLVEPLVSPGDDVNGSVREVIDFMNSYNLTREDFESITDIGKWESQSDVAASIPSKV
KAAFTRTYNKDVHLAPYATGSVAKKRRVAVEEDIGEGGAAESGEESNNDDDDITKDSMIK
LSKKKPGETVQSKGGRGRGKAAGRGRGKK
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaggtcattttttagcccaggtttcaaggcaaaatcatcaagcagcagtgat
gaaaaaggcaaaggcagttcaaaggctaaagcaagtgcaagtaatcaattggccagtaaa
agaaagaaaacgagcaagaaaagggccttggattcagattctgatgaagaacctttgccg
caaaaactgagaaaaaccacttcaacaaagactgtcattgtcgaatcagatgatgaagat
ttagccattgttaaaaagtcaaagaatgtaaaagattctacaccaaaaaagggtgataaa
cgcaaatggaaaaatgaagagaaagtagcaaagccaaaggaggtactcaagccaaccaat
gctgatgacttttttggctcaactccagtagcgcagaagacaaagacttcgctgttaagt
aaagcaagaacacaaaaagatagcagtcaaaccaaagcaagtgaaggctcaactgggaaa
aaaaaagaatcacaaaaaattgatgacgagttcatggagattatagatgacgatgatgac
gattttgaaaaaagtatacaggaactggaatcatgtgacaaaagcaacaagaaagagaag
caaagaacaagtctggaaaagcccaagtttatcaatgaatcgccgataccgaagaagacg
ggaggtggcaaaaaagtaaacgaaaaggggcctaagaaagatgaagaaagggaacctcta
aaaaagacctcacctatgaaaccttctccaaccaaagctaagcaagtgagaagtggtgga
aacaaaaaggaagaagagtcaaagaagactcctgaaaagccgaaggaagcatcagaagaa
aaaaagaaacaagaagctactccagtcgaaaaaaagaaatcgttttacgcgtataaagct
cgagagggcccgagaaatcttggtgctaaggagttaccgcagggcgcagataattgtctt
gagggcttatcctttgtcatcaccggtattctcgagtcaatagaaagggagcaagcagtc
gaccttgtcaaacgtcatggtggtaaagtggtatctgctgtgagcaagaaaacaagctac
cttgttgttggaagagacccgggagaaagcaaaatttcaaaggcatcaaattttgggaca
aaacaactcgacgaagataaattttttgacctcatcagacagatgccaggaaaagtttct
aaatatgaaccaccacaagagaaaaagaaaaatgagccttacaaatctccatccacgaca
attacttctgagagtaagtatttcaagagcgatgagaagacacatgtagagtctaatacc
tcgttgcagcaagatcatagcaagaaggcagatacaagggagcagagtcaatcaagccaa
ctgagtcaatcaagccagccgagtcaatctacacagtcaagtcaagacatatctcagcaa
aaagcagaaactttgctgtgggtagacaaatacaaaccaaaagtaatgaagaacattgtt
ggtcagcatggtgacaagagcaacgcgaagaaacttctgaactggcttttgaagtgggct
gacaataatcaaggaggagccaagccgaaaggaaagggtggtttttttgctgggaaagaa
gatggatcaatctttaaatgtgctctcctttcgggtccaccgggagtaggaaagacaaca
acagcaacaattgtatgccaggaagctggctattcctttatggaaatgaatgctagtgat
acccgaagcaaaaagactttgcagcaatatataaccgaagtgttgtcaaataagactatg
gaccattccttgagtgggaagagagaaactgtgacaggacgccatgcgcttattatggac
gaagttgatggaatggctggaaacgaggatagaggaggagtgcaggaactcattggactg
attaaaggaacgaaaattccaattatttgcatgtgtaacgacagaaatcacccaaagatt
cgaagtctggcgaattattgtttcgatctcagattctacaaacctagaatcgaacagatc
aagggatttgcaatgtcagtatcatgtaaagaggggcttagaattccacccccggttatg
gagcagataatcgttggtgccaatcaagatataagacaggttcttcataatttgcaaatg
tggtcatccaccaagaagtcgatgacttacgatgaagcaaagaatgaggcccagaaatcc
cacaaaaatatcaaaattggcccatttgacattaccaagagactcttctctgcatctgat
tctcaaaatatgagtttgcaagataaactcagtttatttttcgaagattattctttcgtg
ccgctgtttattcaagagaattacttactctcgaatccattgcaagcaagaggcagtaag
cgaaaggttcttgatcttatgagctcagctgcagattttatagccgacagtaatttggtt
gagaagaagattagagaggctcaagcctggagtttgttgcccctccagggctttttctcc
tgcgtcgctgctcctgatatgatgcgtggtggtttaggacagcgaattaattttcctcaa
tggctaggaaaaaactcaagccagggaaagcacgatagaatacttcaagagctgaaagtt
cacactcgtttgagctgtttagctgggaagtcagatcttaacatggactatctttggttg
atgaagaagaagttggtcgaacctctagtcagcccgggtgatgacgtcaacggctccgtg
agagaagtaatcgactttatgaattcttacaacttaactcgtgaggactttgaatctata
actgacattggaaaatgggaatctcaatctgatgtagctgcctcgatcccatcaaaggtt
aaagctgctttcacgcgcacctacaacaaagatgtacaccttgctccttatgcaactggc
tctgttgctaagaagagacgcgttgctgtggaagaagatataggcgaaggaggtgccgcg
gagtctggggaggagagtaacaatgatgacgatgacatcactaaagactcaatgataaaa
ttatctaaaaagaaaccaggtgagactgttcaaagtaaagggggacgagggagaggaaaa
gctgcagggagaggtagaggaaagaagtaa
DBGET
integrated database retrieval system
