Rhopilema esculentum: 135690562
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Entry
135690562 CDS
T09994
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
res
Rhopilema esculentum
Brite
KEGG Orthology (KO) [BR:
res00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
res03041
]
135690562
Enzymes [BR:
res01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135690562
Spliceosome [BR:
res03041
]
Complex C
Other components
Complex C specific factors
135690562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
ResIII
Flavi_DEAD
ABC_tran
AAA_30
AAA_7
SRP54
nSTAND3
Cas3-like_C_2
T2SSE
Motif
Other DBs
NCBI-GeneID:
135690562
NCBI-ProteinID:
XP_065064224
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MASNKSVLKFWKPGGDAPGSSVHLERSEEGDGAGTFFRYNPNISLSIQKQRQELPVFKYR
NHILYLIEKFQTVVLVGETGSGKTTQVPQYLHEAGWTKDGKIVGVTQPRRVAATKVTERV
AEEMGVFVGEDVGYAIRFDNCTDPDRTRIKFMTDGYLLREMMSDPLLSKYSVIILDEAHE
RTLYTDIISGLLKKIMKKREDLRLIVSSATLDAQEFHNFFNFNHSKHDSSKDSSVIMTVE
GRMFPVDIFYIQSPVPDYLKATVETVLSIHKDEPVGDVLAFLTGQDEVEHVVSQLRDEAA
NVKLGNMKLMVLPMYGGLPIAEQLKVFQRTPHNTRKVVVATNIAEASITINGIVYVVDSG
FVKLKAYNATSGIESLVVVPLSKASAEQRAGRAGRVRAGKAYRLYTEDSYLDLEKRTCPE
MQRSDLAPVIIQLKSLGISNVLRFPFLSRPPAQCMVRGLELLYALGAVNESGDLTDPLGL
RMAELPVGPMFAKMLLNSGEFGCSEEALQIAAMLQLENIFIIPHNKRKAADHAKLKFSVH
EGDHLTLLNVYRAFVKYNKNSKWCHENFLNFKALSHAVRIKGQLEAIMKRYKVPVVSCEG
DDEKIRKCILSGFFANVAKYHPAGEYRTVRDDHSLHLHPQSVLSTETPPQWVVFNQVLLT
GKEYMRDVTVIDPDWLLELAPHYYEYGTERSVMSKRARLET
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaacaagtcagtactgaagttttggaagccaggaggagatgcgcctggctca
tcagttcacctagagagatcagaagaaggtgatggtgcaggaacattttttcgatataac
ccaaatatatctttgtctattcaaaagcagaggcaagagttaccagtttttaagtataga
aatcatattctttacctcattgagaagtttcaaacagtagttcttgttggagagacaggt
tctggaaagactacacaggtgccacagtatctacatgaggcaggatggacaaaagatggc
aaaattgttggagtcactcagccaaggcgtgttgctgcaacaaaagtgacagaaagagtt
gctgaggaaatgggtgtctttgttggagaggacgttggctacgctattaggtttgataat
tgcacagatccagatcgtacaagaataaagttcatgacagatggttatttgttgagagag
atgatgtctgatccacttttatcaaaatatagcgttattatacttgatgaggcccatgaa
cggacactgtacactgatataatctccggcctactcaaaaagataatgaaaaagcgtgaa
gatcttcgtttgatcgtttcatctgcgacattagatgcgcaggagtttcataatttcttc
aatttcaaccacagtaaacacgattctagtaaagattcatcagtaatcatgactgttgaa
ggaaggatgtttcctgttgacattttctacatccagagtcctgttccagactacctaaaa
gcaacagttgaaacagtgctatcaattcacaaagatgagccagttggtgacgttttagcc
tttcttactgggcaagatgaggttgagcacgttgtttcacagctaagggatgaagctgca
aatgtcaagttaggaaacatgaaattgatggttcttcctatgtatggaggacttcccatt
gcagaacagcttaaagtctttcagcggaccccacataatacacgaaaggttgtcgttgcc
acaaatattgcagaggcgtcaatcacaatcaatggcatcgtatatgttgtagactctgga
ttcgtcaagctgaaagcctacaacgccacttcaggaatcgagtctctggtagttgttcca
ttatccaaggcatcagctgagcaaagagctggaagagctggcagggttagagcaggcaaa
gcatacagactttacacagaggacagctacttggatcttgaaaaacgtacatgtcccgaa
atgcaaagatctgatcttgctcctgtcatcattcaattgaaaagtcttggaatttcaaat
gtattacgtttcccttttctttcgaggccacctgcacaatgtatggttcgagggctggaa
cttttgtacgcacttggagctgttaacgaaagtggagacctaacagaccctcttggactt
cgcatggcggagcttcctgttggtccaatgtttgccaagatgctacttaattcaggagag
tttggctgttcagaagaagcccttcaaatagctgcgatgcttcagctcgaaaatatcttt
attattccacataacaaaaggaaagccgctgatcatgcgaaattgaagttttctgttcac
gaaggagatcatttaacattactaaatgtttatcgagcatttgttaagtataacaagaat
tctaaatggtgtcatgaaaacttccttaactttaaagctttaagccatgcagtaagaatt
aaagggcagcttgaggcaatcatgaagcggtataaagtcccagtagtttcttgcgaagga
gatgacgaaaaaatcagaaaatgtattttatcaggattttttgcaaatgtggcaaaatat
catccagctggcgaatataggacggtaagagacgatcactcactgcatcttcaccctcag
agcgtcctatcgactgagacacctcctcagtgggtggtttttaaccaggttcttttgaca
ggtaaagaatatatgagagatgtaacagttattgatcctgattggttgctcgagctggca
ccccattattacgagtatgggacggagcggtcagtgatgagcaaacgagcacgcctggag
acgtaa
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