KEGG   Rhopilema esculentum: 135691388
Entry
135691388         CDS       T09994                                 
Name
(RefSeq) nucleoporin SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
res  Rhopilema esculentum
Pathway
res03013  Nucleocytoplasmic transport
res04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:res00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    135691388
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    135691388
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:res03019]
    135691388
   04131 Membrane trafficking [BR:res04131]
    135691388
Messenger RNA biogenesis [BR:res03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     135691388
Membrane trafficking [BR:res04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    135691388
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd WDR90_beta-prop_4th EIF3I Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Ge1_WD40
Other DBs
NCBI-GeneID: 135691388
NCBI-ProteinID: XP_065065310
LinkDB
Position
Unknown
AA seq 357 aa
MYAARVIPSEHKDLIHDVSFDFYGRRMATCSSDQSVKVWDQDDDGNWQCTSDWKTHSGSV
WKVTWAHPEFGQVLATCSFDRTVSIWEEQVGDSGVYASGRSHWVRRSALVDSRASVTDVK
FAPKHLGLIVATCSKDGVIRIYEAPDMMNLSHWSLKDEIHTKMACSCLSWSPSRVHPIML
AVGSDDSSNNTEPKTHIYQLNDKWLKIPSITSSTDPVHDVAFAPNVGRPHHLLAIAGKDV
QILAIRPSSRDVTNAGIPTKMEGSVAAVFKDHDTQVWRVEWNITGTILASSGDDGCIRLW
KANYLDNWKCIAELKGDGAPLPGSNIRRQSGQNQQGHREPGQFSAANLANFKSHPMW
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgtatgccgcaagagtcattccatcagagcataaggatctcatacacgatgtgtcattc
gatttttacggtagaagaatggctacctgttcatccgatcaaagcgtcaaggtatgggat
caagatgatgatggaaactggcaatgtacttcagactggaagacccattcaggctctgtg
tggaaagtaacatgggctcacccagaatttggacaggttttggctacttgctcctttgat
aggactgtctctatttgggaagagcaagttggagactctggtgtctatgcctccggtcgc
agccactgggttcgtagatctgctcttgttgatagcagagcgtctgtaacagatgtcaaa
tttgcaccaaaacaccttgggctaattgtcgcaacgtgctcaaaggatggcgttattcga
atctacgaagcgccagacatgatgaatctaagccactggtcgctgaaggatgaaattcac
accaaaatggcatgtagctgtttatcatggagcccttccagagttcacccaataatgctt
gcggttggtagtgacgacagcagcaataacacggaaccaaaaacacatatataccagtta
aacgacaaatggctaaagataccatctatcacatcatcaacagatccagttcatgatgta
gcatttgctccaaatgttggcaggccacatcatttgctagccattgctggaaaagatgta
caaatactggccatcaggccctcgtcgcgtgatgtaacgaatgctggcatcccaacaaaa
atggaagggagcgttgcggccgttttcaaagatcacgacacacaggtttggcgcgtggag
tggaacatcactgggaccattttagcctcctcgggtgacgatggctgtattcgactatgg
aaagctaactatctagacaactggaagtgcattgcagaattgaaaggagacggagctcca
ctcccggggtctaatatcaggcgtcaaagtggacagaaccaacagggacacagagagcct
ggtcagtttagtgctgctaatttggccaacttcaagtcccatccgatgtggtga

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