Rhopilema esculentum: 135691558
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Entry
135691558 CDS
T09994
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
res
Rhopilema esculentum
Pathway
res03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135691558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135691558
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135691558
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135691558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
135691558
NCBI-ProteinID:
XP_065065506
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MADKRKLQAEIDRCLKKVNEGVEAFDDIWQKVQSASNSNQKEKYEADLKKEIKKLQRLRD
QIKSWAASNDIKDKKPLLEHRRLIETQMERFKVVERETKTKAYSKEGLGQANKVDPATKE
REECREWLNGSIDHIKLQIDQFECEIENLQPGNKKKKIDREKTIKIEAHRERIEKHRFHI
RNLELILRHLDNESLEVDTVNKLKEDVVYYIENCQEPDFLDDEELYDDFDLESDLALSAE
LVRSPSENNKDDDDDIPSPGSSVSSSSGYMAGAANSPSSKSNPNVNSPRKSKSSSTSSNN
GTTTTITTTPNSSSAVTTTTVAAAATTTSSRTKSFSTVTTSATSSSSPPGIITTATITTS
SSPSPPLSSTLLADSPSTTPISLPLSSVSSAFSSTKTATLTSSSKAVGPPQVTPYAVAAG
AVQPSPISQKPLSQQVQAINPSPTQIVTSSVSNHVDSAQYPALSIARSTESKLPEGFSTL
TASQQSTVQCSVPMSSIQSEDVIETILTSSALDSSTQPTESITAFSQSGVSIASSLAASI
AMNHSPADSITVAPPGSLSDPLHLPTDYGTKSRMFDGTNASSVPGTTKPPPQTQEVHLQP
LLGVAPLGHVPLVRGRMNQLNMLEAAFHHLPQRQDCERMKPRNAVPIAPYHHHPPPPHID
TLEFFQKLATETLFFIFYYQEGTRAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDE
YEQGTYIFFDYEKWSQRKKEGFTFEYRYLEDKDLP
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaacgtaaactacaagctgaaatagacagatgccttaagaaggtgaatgaa
ggggttgaagcatttgacgacatttggcaaaaggttcagtcagcctcaaatagtaatcaa
aaagaaaaatatgaggcagatctcaaaaaagaaataaagaaacttcagaggttgagagac
caaattaaatcatgggcagcatctaatgatataaaagataagaaacctctcctagaacac
aggaggctaatcgaaactcaaatggaaaggttcaaggtagttgaaagggaaacaaaaacc
aaggcttactcaaaagaaggtcttggacaagcaaataaagtagacccagcaacaaaagaa
cgagaagaatgcagagagtggttaaatggctctatagatcatataaaacttcagattgat
cagtttgaatgtgaaattgaaaacctgcagcctggaaataagaagaaaaagatagacaga
gaaaaaacaattaaaattgaagcgcacagggagcgaatagaaaaacacagattccatata
agaaatttagagctcatattgaggcatctggacaatgagagtttagaggttgacacggtg
aacaagttaaaagaagacgtagtttattacattgaaaattgtcaggaacccgattttttg
gatgatgaagaactttacgatgactttgatcttgagtcggacctagcactgtctgcagaa
ttagtacgatcgccatcagaaaacaacaaggatgacgacgatgatattccgtctccgggt
tcatctgtaagctcctcatctggctacatggcaggggcggccaactccccgtcttcaaag
tcaaatcccaatgtgaactccccaagaaaatctaaatcatcgtctacttcatcaaataat
ggcacaacaacgacaatcacaacaacaccaaacagcagtagtgcagtcacaacaaccaca
gttgcagcagctgcaacgaccacaagttctcggacaaagtcattctcaacagtaacaaca
tcagcaacctcgtcatcgtcaccgccaggtataattacaacagcaacaataacaacatca
tcatctccttctccaccattgtcgtctacactgctagcagactccccatctacgacacca
atctccttgccgttgtcatccgtcagcagcgcgttctcgagcactaaaactgcaactctc
acttcctcgagtaaagccgttggaccaccgcaagtaaccccatatgcagtagctgcagga
gctgtccagccaagtccaatctcgcaaaaacccttaagtcaacaggtacaggcaataaac
ccgtcaccaacacaaattgttacgtcatcagttagcaaccacgtcgacagcgcacagtac
ccagctctttcaattgcacgaagtacagaatcaaagttacctgagggattcagcacctta
actgcgtcacaacaatcgacagtccagtgttccgtacctatgtcaagtatccagtcagaa
gacgtgatcgaaacgattctgacgtcatccgcactagactcctcgacacaacctaccgaa
tccataacagcgtttagccagagtggagtttctattgctagtagtttggcagcctcgata
gcaatgaatcacagcccggcagacagcataactgtggcaccccccgggtcactgagcgat
ccacttcatctaccaactgactatggaacgaaatctaggatgtttgatggtacaaatgca
tcatctgttccaggaacgacaaaacctcccccacaaacccaagaggttcatttgcagccc
ttactgggagtagcgcctctaggacatgtgcctctagtgaggggaagaatgaaccaactg
aatatgcttgaagccgcatttcatcatttgccacagcgccaggattgtgagcgaatgaag
cccaggaatgcggttccaatcgcgccttaccatcaccacccaccacccccgcacatcgac
acacttgaattcttccaaaaacttgctacagagactttgttttttatattttactatcag
gagggcacaagggctcagtatttagctgcaaaggctctgaaaaaacagtcttggagattt
cacactaaatatatgatgtggtttcagaggcacgaagaacctaagacaataactgatgaa
tatgaacagggaacatacatattctttgactatgaaaaatggagccaacgaaaaaaagaa
ggtttcacgttcgagtacaggtatctagaggacaaggatttaccctag
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