Rhopilema esculentum: 135691673
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Entry
135691673 CDS
T09994
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
res
Rhopilema esculentum
Pathway
res03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135691673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
res03021
]
135691673
03019 Messenger RNA biogenesis [BR:
res03019
]
135691673
Transcription machinery [BR:
res03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135691673
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135691673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
Torus
zf_CCCH_4
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_2
zf-C3H1
zf-CCCH_2
eIF3g
Motif
Other DBs
NCBI-GeneID:
135691673
NCBI-ProteinID:
XP_065065683
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MSTMEELVASVKDIKFDIETYIEHQVGIQPLPFPGMDKSGSAVCDFFFQGSCTRGHLCPF
RHTIGEKAVVCKHWLRGLCKKGDECEFLHEYDMSKMPECYFFARFGTCNNKECPFLHVDP
MTKRKECPWYDRGFCKHGPHCKNKHVRRVMCLNYLCGFCPEGPNCKHMHPRFDLPLYENK
TVPGQIICHACGEPGHKITTCPVVQQFREKQMAGGIQMQQLPRRPLELVTCFKCRQRGHY
ANRCPFPAAEQNPMYRPRMIMQQQQQSLQMPVPSTFSAIQTIQTLG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgatggaagagcttgttgcgagcgtgaaagacatcaaattcgatattgagacg
tacatagaacatcaagtcggaattcagcctttaccatttcctggaatggataagtctgga
tctgccgtgtgtgatttcttttttcaaggttcctgtacaagagggcatctttgtcctttc
aggcatacaattggagagaaagcagtggtctgtaagcattggctaagggggctttgcaaa
aagggagatgagtgcgagttccttcatgagtatgatatgtcaaaaatgcctgaatgctac
ttctttgctagatttggaacttgtaacaataaagagtgtccttttcttcatgttgaccca
atgacaaagagaaaagaatgtccttggtatgatagaggcttctgtaaacatggtccacat
tgcaaaaacaagcatgtgagaagagttatgtgtctgaattacttgtgtggattttgtcct
gaaggacccaactgtaaacatatgcatccaaggttcgatttgccactttatgaaaacaaa
acagttccagggcaaattatttgtcatgcttgtggagaaccaggtcacaaaataaccaca
tgtccagtcgttcaacagttcagagagaaacaaatggctggtggtattcaaatgcaacaa
ctccctaggaggccattagaattagtaacctgctttaagtgtcgtcagcgtggccactat
gcgaacaggtgtccatttccagcagcagaacaaaaccctatgtaccgtccgagaatgatt
atgcagcagcaacaacagtcccttcaaatgcctgtcccatctacatttagcgccattcaa
actattcagactctcggttga
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integrated database retrieval system
