KEGG   Rhopilema esculentum: 135691712
Entry
135691712         CDS       T09994                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
res  Rhopilema esculentum
Pathway
res03030  DNA replication
res03410  Base excision repair
res03420  Nucleotide excision repair
res03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:res00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    135691712
   03410 Base excision repair
    135691712
   03420 Nucleotide excision repair
    135691712
   03430 Mismatch repair
    135691712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:res03032]
    135691712
   03400 DNA repair and recombination proteins [BR:res03400]
    135691712
Enzymes [BR:res01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     135691712
    6.5.1.6  DNA ligase (ATP or NAD+)
     135691712
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     135691712
DNA replication proteins [BR:res03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    135691712
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     135691712
DNA repair and recombination proteins [BR:res03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     135691712
   NER (nucleotide excision repair)
    Other NER factors
     135691712
   MMR (mismatch excision repair)
    Other MMR factors
     135691712
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C YagK_YfjJ_C
Other DBs
NCBI-GeneID: 135691712
NCBI-ProteinID: XP_065065737
LinkDB
Position
Unknown
AA seq 869 aa
MSQKTQRSIVSFFTAVKSKPKDKEDNKPSQNGSTSSSNSGEEGTRDSPIKRGKKIKRRIE
ESSDEEENQIESEESAKPKENGNKESSESGTNIDRPKTPPKRITAKRTKRHKKDPTEQRT
SGEAKEILKGSGENNASKSSYNEIDMKDVGDIKKEDVDTDNLANNGEKQEKSKSEISVQK
TDKGESPEKKKSEAKSTTKSGFFFQAKKTTDSKAESKLDPAIYSPNKANYDPIKDACWAQ
GQPVPYGALSRTFQIIEDTSARLKITSTLCNFFRSVIILTPDDLLPSVYLCLNKVAPAYE
GIELGIGETILMKAVASSTGKSLQQMKAMAAEKGDLGIVAEQCRTNQRMMFAPPKLSIQS
VFSKLKEIAQMTGSSSMGKKQDKIQSMFVACKNSEARYLIRSLGGKLRIGLAEQSVLAAL
GHAMALTDEARGHKKSSDAIKDAKDAAALAIKTAYCELPTYDILIPTLLKQGWQDISKYC
HITPGIPLKPMLAHPSKGISDVFKRFDTAAFCCEFKYDGERAQIHMHENGDVNIYSRNQE
NNTSKYPDIIARISKVTKENVKSCIIDTESVAWDKDKKQILPFQVLSTRKRKDADASEIK
VQVCVYAFDLLYLNGEPLVRQSFRKRRELLQESFNEIEGEFMFAKSMVSSDADDITEFLD
ESIKSNCEGLMVKTLDADATYEIAKRSHNWLKLKKDYLEGVGDTLDLIVIGAYHGAGKRT
GKYGGFLLACYDEENEEFQSICKMGTGFSDEDLAKHHEFFQSHVIDKPRPYYRYGDSVTP
DHWFEAVQVWEVRAADLSVSPTHKAAISIVDPERGISLRFPRFLRIRDDKKPEEGTSAQQ
VAEMYRNQETVKNNSEAGAAATTAEEDFY
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgtcgcagaaaacgcaacgaagcattgtatcattcttcacagctgtgaaatctaaaccc
aaagacaaggaggacaacaaaccatcccaaaatggatccacaagctcttcaaatagtggc
gaagaagggaccagagattcaccaattaagagaggaaaaaagataaaaagaaggatagaa
gaaagtagtgatgaagaagaaaaccaaattgaatctgaagaaagtgcaaaacccaaagaa
aatggaaataaagagagttctgaaagtggcacaaacatagacagaccaaagactccacca
aaacgaataacagcaaaaagaactaagaggcacaagaaagatccaactgagcagagaaca
tctggagaggcaaaagaaatacttaagggttctggagagaacaatgctagtaaaagttcc
tacaatgaaatagatatgaaagatgtaggtgacattaaaaaggaagatgtcgacactgac
aacctggccaacaatggggaaaaacaagaaaaatccaagagtgaaatttctgtgcaaaaa
acagacaaaggtgaatctcctgaaaagaaaaagagtgaagctaaatctacaacgaagtct
ggttttttctttcaagccaaaaagacaacagattcaaaagcagaaagtaaattggatccg
gcgatttattctccaaataaagcaaattacgacccaatcaaagatgcttgctgggcccaa
gggcagcctgttccctatggagccttatcgcgcacatttcagattatcgaagatacttca
gcaagattgaagatcacctcaacattatgcaacttctttcgatcagtcatcatcttaact
ccagacgatctcttaccgtccgtttatttgtgtttgaacaaggttgcgccagcctatgag
ggtattgagctcgggattggtgaaacaattctaatgaaagctgtggcgtcatcaacaggc
aagagtttgcagcagatgaaagcaatggctgcagagaaaggtgatttgggaatcgttgcg
gagcaatgtcgcacaaaccaaagaatgatgtttgcacctccaaagttatcaattcagtca
gtgttctcgaagttgaaagagattgcacagatgacagggagttcgtcgatgggcaaaaag
caggacaaaattcagtcaatgtttgttgcttgcaaaaattcagaagcaagatatttgata
aggtctcttggtggcaagctgaggatcggcctagccgagcaatctgtcttggctgctttg
ggacatgcaatggctcttacagacgaagctcgtggccataaaaaatccagtgacgccatt
aaggatgcgaaggatgcagcggcattggcaatcaaaactgcctattgcgagcttcctact
tatgatatattgattccgacactgctcaagcaaggctggcaagacatctcaaaatactgt
cacattacgccaggtatcccgttgaaaccgatgcttgctcatccatcaaaaggcatctct
gatgtattcaaaagatttgataccgctgccttctgctgcgaattcaagtatgatggggaa
agagcccagattcacatgcacgagaatggagacgtaaatatctacagcagaaaccaagaa
aacaatacaagcaaatacccagacatcattgctcgtatttcgaaggttacaaaagaaaac
gtcaagtcatgtatcattgatacagagtcagtggcatgggacaaagacaagaaacaaatt
ttgcctttccaagtccttagcacgagaaaaaggaaggatgctgatgcctcggaaatcaaa
gtacaagtctgtgtttacgccttcgacctgctgtacctaaacggagagccacttgtcagg
cagtcattccgaaagagaagggagctgctgcaggaatctttcaacgaaatcgaaggagag
tttatgttcgccaagtcaatggtttcttcagatgctgatgacatcacagagtttttagac
gaatcgataaaaagtaactgtgaaggcctgatggtaaaaactcttgatgctgacgcaact
tatgaaatcgcaaaaaggtcgcacaactggctcaagttgaagaaagattacctggaagga
gttggcgatactcttgatcttattgtgatcggagcctaccatggagcagggaaacgaaca
ggaaaatatggagggttcctattagcctgttacgacgaagaaaacgaggaatttcaatct
atttgcaagatgggcactgggttcagtgatgaggaccttgcaaagcatcacgagttcttt
caaagtcacgtgattgataagcctcgtccttattatcgctatggtgattctgtaacacca
gatcattggttcgaggctgttcaggtttgggaggtcagagctgcagatttgtctgtgtct
ccaactcacaaagctgcgatttcaatcgttgatcctgagagaggaatctcgctcaggttt
ccaagatttttaagaatacgcgatgacaagaaaccggaagagggtacttctgctcagcag
gttgctgaaatgtatagaaatcaagaaactgtaaagaataattctgaagcaggagcagct
gcaacaacagcggaagaagatttctactag

DBGET integrated database retrieval system