Rhopilema esculentum: 135692121
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Entry
135692121 CDS
T09994
Name
(RefSeq) probable ATP-dependent RNA helicase DDX47
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
res
Rhopilema esculentum
Brite
KEGG Orthology (KO) [BR:
res00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
res03009
]
135692121
03029 Mitochondrial biogenesis [BR:
res03029
]
135692121
Enzymes [BR:
res01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135692121
Ribosome biogenesis [BR:
res03009
]
Eukaryotic type
90S particles
Helicases
135692121
Mitochondrial biogenesis [BR:
res03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
135692121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
SecA_DEAD
AAA_19
Motif
Other DBs
NCBI-GeneID:
135692121
NCBI-ProteinID:
XP_065066230
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MADEIGKNQSPDDASTFASLGVVDVLCQACERLGWKSPTKIQKEAIPVALEGKDLIGLAE
TGSGKTGAFAVPVLQALLENPQRLFALVLTPTRELAIQISEQFEALGSSIGVKCAVVIGG
IDMVTQAVALAKKPHIIIGTPGRLIDHLENTKGFSLRSLKYLIMDEADRILNMDFEEEVD
KILRIIPKERRTYLYSATMTKKVQKLQRASLQNPVKVEVSTKYTTVEKLQQSYLFIPHKF
KDCYLVSILNDLAGNSFMVFCGTCNNVQRITLLLRHLGFQAIPLHGQMSQSKRLGTLNKF
KSKEKSILIATDVASRGLDIPHVDIVVNFDIPTHSKDYIHRVGRTARAGRSGRSITFVTQ
YDVELYQRIEQLIEKKLPLYPTVEEEVMLLVERVTEAQRFAKMEQRDIGEKRKRPLNAVD
DEDQTSLKSLTKKFRSEKGGRNKQTFRKKKGK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaaattgggaaaaatcagagtccagatgacgcatctacgttcgcttctttg
ggtgtagtcgatgttctgtgtcaagcatgtgaaaggcttggttggaaaagccctacaaaa
attcagaaagaggctatacctgttgcactggaaggcaaagacttgattggattggcagaa
actggctctggcaaaacaggagcatttgccgttcctgtattacaggcacttcttgaaaac
ccacaaaggctatttgcccttgttctcactcctacaagggagttggcaatccagatatca
gaacagtttgaagccctcggttcctcaatcggagttaaatgtgctgtcgtaattggtggt
attgacatggttacacaggcagtagctctagccaaaaagccccatataattattgggaca
ccgggaagactcatcgaccacttggaaaatacaaagggcttcagtttgcgatctttgaaa
tacttaataatggacgaggcagatcgaattttgaatatggattttgaagaagaagttgat
aaaatacttagaattatcccaaaagaaagaaggacttatttatattctgcaactatgact
aaaaaggttcaaaaattgcagcgagcctcgctgcagaatcccgtgaaagtagaagtatca
accaagtataccacagttgaaaaattgcaacaaagctatttatttattccccacaagttc
aaggactgctatcttgttagcatactaaacgatcttgctggcaattcattcatggtattc
tgcggaacttgcaataacgttcaaagaatcaccttgctgcttcgccatttggggtttcaa
gcaataccactccatggacaaatgagccagtcaaaacgtttgggaacattgaacaaattc
aagtcaaaagagaaatcaattttgatagcgactgatgtggcaagcagagggctggatata
cctcatgtcgacattgttgttaattttgacattccgactcactcaaaggattacatccat
cgtgtgggaagaactgcacgcgccggcagatctggaagatcgataacatttgtgacacag
tatgatgttgaattgtaccagcgaattgaacagctgattgagaagaaactgccgttgtac
ccaactgttgaggaggaggtcatgctgcttgtcgagagggtcactgaagctcagagattc
gcaaaaatggaacaacgtgatatcggggaaaagaggaaaagaccattaaatgcagtcgat
gatgaagatcaaacatctttaaaaagtcttacaaagaaatttcgatccgaaaaaggaggt
agaaataagcaaacatttagaaagaaaaaaggaaagtaa
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