Rhopilema esculentum: 135693505
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Entry
135693505 CDS
T09994
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
res
Rhopilema esculentum
Pathway
res04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
res00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135693505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
res04131
]
135693505
Membrane trafficking [BR:
res04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135693505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_Vps41
Clathrin
TPR_VPS8_2
zf_RING_Vps8
zf-RING_Vps41
zf-RING_5
WD40_CDC20-Fz
zf-RING_2
zf_RING_Vps8_fungal
zf-RING_UBOX
Beta-prop_HPS5
zf-RING_11
zf-C3HC4
Beta-prop_DCAF4
FANCL_C
zf-rbx1
ANAPC4_WD40
Beta-prop_EML
PHDvar_NSD
WD40_Prp19
EIF3I
Motif
Other DBs
NCBI-GeneID:
135693505
NCBI-ProteinID:
XP_065068087
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MEEQQETGDEKDGSNREVLAGLLAASGRAQSFDSLDSLDVDYTSKNDRGSFKFDGTVDSN
EFDLPEIDEDNLPSLEDILKEPDDAFSVDSLLLSPVSTFAGLPNLAKHKGLIANGSVLRH
VILKKISGQLVDACARRDAGLPTAMAVSMLIAIGTSHGLVLVFEPRDQALKLILGNTSDG
ANYGAVTALGINRECSRLLCGYAKGQITMWDLSNGNCLRVITDAHPPGYAVLHLQFTDDS
TIAMCSDSSGSVYSLSFRRLITRSCESTCFFSGSKGEVCIMAPLHLHIGMRDSQLHDSSI
LAMASLTKVIVVNLKPFPKAIFTKKLPGGRNTLPLLGWQFAVIQKEENSKYLCPVLAFAR
DKVIHFYQIWKYGEEFKFVPFQTIETEYSLVSLHWMNPKIIVIIDSLERIRTIDVKTKEE
LECLDLSIVQLVYGSSYFKSLATGGNVSKALNAASEYACYHSVQVFNGQLLLLGTKSIHC
LTIRSWRDRIDYFVKQNLFLEALQLALSFYEERAKAVVNLAGSRQKRKIFIAQEIAEVLQ
SYVEISFTVNCPKTHKEEMLAEYFSSLVPTCVEYCVATGNLDLLFGEIYDRFSEEPISKK
VFLEGLEPYILDDRIATLTPVVMQDFVKHFEATRQLRKLEACLVHLDVTAVDLHHMVKMC
WTHSLYDLAIYVYNKGMNDFLSPMEEMLNILRSLLKSKRELTYEESAVGYKLLVYISCCL
TGRQYPRGLIDEDKVSRVKCEVYEFLVAKRSKDIGLDDQSYPSLHVLLEFDTREFLNVMS
IAFEEPEFEVDHSSFGQVSKRQKVVDILLQLMVTNTLFTPTQVGWLFTFIARQMAKFEGS
IRVNKLLFEQVLEYLTNPDDDSRHEERQQALLELLSAGGLHQFDDSRIIKLAEAAKFFQV
CELLYEKNHQYAQVLSCYLRDPARKHQSFSYIVEMMSADSFTDLERGVMQNAVLAALDQL
VEIDSQKMALLIIEYFSDCLSHVVGKLEYNSEAQYEFLKGVFMKRESSKQRPRGDLFNPD
ASTHEQFIQLMCRYDPQNVYPYLRETDNYRLEQTLAIVRKMKVVDATAYLLERTGDVKGA
FNLLLDNLKDKVQDFSESFAVDDDPLSSKEGREKRRSLKNALMLVIHVCQRNSSRLDAEE
REALWFPLLETIMAPQRRVKDVTSIHFVAFKELTKQVLSSMMGHIALPAVLKKIMQDSAY
NSGKFGEIKELILGMLDTYNYELTLLQTTKSLLGKDLHHQYCTQKNFLSRGYSHEYLTCN
VCYETFGKRTTPDSVSDVIVFRCNHAFHKQCLEGSVGYGNDMKCILCNKTTSIGSVYSGS
SAESSSSAGKTDENPTKPKHKKGEKKTLFTPQQELALQNLAKHNNESPRLRVLSDLRPTD
DMWVNSQRLIFARPGSVIGASEDITLGGKEFKLRLAPGRM
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacagcaagaaaccggagacgaaaaggatggatctaatcgagaagttctggct
ggacttttggctgcgtcaggacgggcacagtcatttgactcactagattcgttggatgtt
gactacacttcaaaaaatgatagaggctccttcaagtttgacggtactgtagattctaac
gaatttgaccttcctgaaatcgacgaagataatcttcctagccttgaagatatccttaag
gaacctgatgatgcgttctcggtcgatagccttcttctgtcaccagttagcacctttgca
ggtcttcccaatctcgccaaacacaaagggctgattgccaacggttctgtgctgcgccac
gtcatactgaagaagatttctgggcagctggtggatgcatgtgcgagacgagatgctggt
ttaccaacagcaatggctgtctcaatgttgattgccattggcacttcacatggtcttgtt
ctagttttcgagcctcgcgaccaggcattgaaactgatattaggtaacacttcagatggg
gcaaactatggtgctgtcacagcgttaggtatcaacagagagtgctcaaggcttctgtgc
gggtatgcaaaggggcaaataacaatgtgggatttaagtaatggcaactgtttgcgtgta
atcacggatgcacaccctccaggctatgctgtacttcatttgcagtttaccgatgattcc
accattgcaatgtgtagcgatagcagtggctctgtttacagccttagctttaggaggcta
attaccagaagctgtgaatccacatgctttttttcgggcagtaaaggagaagtgtgtatc
atggcccctttacacctgcacattggtatgcgggacagtcagcttcacgattcttcaata
cttgcaatggcgtctctcaccaaggtcattgttgtcaaccttaagccgtttcctaaagca
atatttaccaagaagcttcctggtggccgtaatacattgcctttactaggctggcaattc
gctgttattcaaaaagaggagaattcaaagtatctctgtccagttctggcatttgcaagg
gataaagttatccacttttaccagatttggaaatatggtgaagagtttaagtttgtacca
ttccagacaatagagacagaatacagtcttgtttcgctacactggatgaacccaaagata
attgtgattattgattcccttgagagaattaggacaatagacgtaaaaactaaagaagaa
cttgagtgcctggatctcagcatcgtgcaacttgtgtatggcagcagttattttaagtca
ctagcaactggcggtaacgtaagcaaggcgctgaatgctgctagtgagtatgcctgttat
cactcagtccaagttttcaatggtcagcttctccttcttggcacaaaatcgatccattgt
ctgacaataaggtcatggagagacagaatcgactattttgttaaacagaatctctttcta
gaagcattgcaattggcgctttccttttatgaggaacgtgccaaagctgtggtcaatctt
gctggtagtcgacaaaagagaaagatctttattgcacaagaaatagctgaagtcttacaa
tcttatgtagaaatttctttcactgttaactgcccaaaaactcacaaggaagaaatgttg
gcagagtactttagcagcctagtgcctacatgtgttgagtactgtgttgccaccggaaat
ctggatttactttttggtgagatttatgaccgtttctctgaggaacccatttcaaaaaag
gtgtttctcgagggccttgagccatacattcttgatgataggattgcaactttaacacca
gttgtcatgcaagattttgtaaaacactttgaggcaactagacaactacgaaaacttgaa
gcatgtcttgtgcacctcgatgtcactgcagttgatcttcatcacatggtgaagatgtgc
tggacgcattccctatatgaccttgcaatttatgtgtacaacaagggaatgaatgacttt
ctttcaccaatggaagaaatgctaaatatcctaagaagtcttttgaaaagtaagcgagag
ttaacttatgaagaatctgctgttggttataagcttcttgtttatataagttgctgctta
actgggaggcaatacccacgaggtctcatcgatgaggacaaagtgtcccgtgttaaatgc
gaggtctatgagtttttagtggcaaaacgaagcaaagacattggacttgatgatcagtcc
tacccaagtcttcatgtgctcttggaatttgatacaagagagttcctcaatgtcatgtct
attgctttcgaggagccagaattcgaagtagatcattcttcttttgggcaggtttcaaag
cgacagaaagtagtggatattttgcttcagttaatggtgaccaataccttattcactcca
acacaagttggatggctttttactttcatcgctagacaaatggcaaagtttgaagggagt
atacgagtaaacaaactgttgtttgagcaagtattagagtatctcactaacccagatgat
gacagtcgacacgaggaaagacagcaagctttgttagagcttctttcagcaggaggattg
caccagtttgatgatagccgcataatcaagctagcagaagcagcaaagttctttcaagtt
tgtgaattattgtatgagaagaatcatcaatatgcacaggtgttgtcttgctacttgcga
gacccggccagaaagcatcagagtttttcttacatcgttgagatgatgtcggcagactct
tttactgatttagagagaggtgtgatgcagaatgctgttttggcggcgcttgatcagctc
gttgaaattgatagccagaagatggctttgttgataattgaatacttctctgactgcttg
agtcatgttgtcgggaagttggagtataactctgaggcccaatatgaatttctaaaagga
gtatttatgaagagagagtcaagcaaacaaaggccccgtggagatttattcaacccagat
gcttcaactcacgagcagtttatacagttgatgtgccgatatgatccccaaaatgtctac
ccatatctgagagaaacggacaattaccgactagagcaaaccctagctattgtgcgaaaa
atgaaggtcgtagatgcaactgcgtatttgttagaaaggactggggacgtaaaaggtgcc
tttaatttgcttttagacaacctaaaagacaaagtgcaagattttagtgaatcttttgcg
gtagacgatgatccattatcaagcaaggaagggagagagaagcgaaggtcattaaaaaat
gccctgatgcttgttatccacgtatgccagcgaaattcctctagacttgacgctgaagag
agagaagcattgtggtttccacttctggagacaataatggctccgcaaaggagagtcaaa
gatgttacttcaattcattttgtagcatttaaggaactaacaaagcaagttttgagcagc
atgatggggcatattgcattacctgctgttttaaaaaagatcatgcaagattctgcatat
aattctggaaaatttggagaaataaaagaattgatccttggaatgttagacacgtacaac
tacgagcttactcttttgcaaacaacaaaatcattactgggcaaggatctgcaccaccaa
tattgtacacaaaagaattttctatcccgtggttattctcatgaatatttgacatgcaac
gtctgttatgaaacgtttggaaagcgcacaacgccggatagtgtgagtgacgtcattgtg
tttagatgcaatcatgcctttcacaagcaatgccttgaagggtcggttggttatgggaat
gacatgaagtgcattctttgcaataagaccacctcaatcggatctgtgtatagtgggagt
agcgcagaatcttcttcaagtgcgggtaagactgacgaaaacccaacaaagcctaagcat
aaaaagggcgagaaaaagacattgttcactccccagcaagaactagcattgcaaaatctt
gctaaacacaacaatgagtcgccaaggcttcgtgtattaagtgacttgcgacctactgat
gatatgtgggttaatagtcagcgcttgatttttgcaaggccaggttcggtcattggagct
tctgaagatatcacattgggcggaaaagaattcaaacttagacttgctcccggcagaatg
tag
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integrated database retrieval system
