Rhopilema esculentum: 135693633
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Entry
135693633 CDS
T09994
Name
(RefSeq) exosome complex component RRP46-like isoform X1
KO
K12590
exosome complex component RRP46
Organism
res
Rhopilema esculentum
Pathway
res03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135693633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135693633
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135693633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
DUF5960
Motif
Other DBs
NCBI-GeneID:
135693633
NCBI-ProteinID:
XP_065068236
LinkDB
All DBs
Position
Unknown
AA seq
231 aa
AA seq
DB search
MAEMEIESGGGGEKQSIIAAGIKCECTQSILTRADGSASFKQGASEALAAVYGPVEVKMN
KEIIDKATVECNYRVKSGLPGNAEKVVERLIRNSCDSVILSSYSPRSAISIIVQVVNDGG
LLLSCALNAAFMALVNADIPLKCMAAAVTCFISKNGKIYFNNSQDDDQVPVATFTFVFES
INYDIISTLSKGTFSTEQYFGCLAASKEAVKSIFSFQRKALERGMSLEKKT
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatggagatcgaatctggtggaggtggcgagaaacaaagtatcattgctgcg
ggcattaaatgtgaatgtacccagtcgattttaacgagagcagatggttcggcgtcattt
aagcaaggtgcatcagaagctcttgcagctgtttacggtccagtagaggtgaaaatgaac
aaagaaattatagataaagctacagtagaatgtaactatagagttaaatctggattaccg
ggtaatgctgaaaaggttgtggaaagactaataagaaatagctgtgattcagtaattcta
agttcttatagcccaagatcagcaatttcaattattgttcaagttgttaatgatggagga
ctgctgttatcatgcgctctcaatgcagcctttatggctctagttaatgcagatattcca
ttgaagtgcatggcagctgctgtgacttgctttatctcaaaaaatggcaagatctatttc
aataattcacaagatgacgatcaggtaccagtcgctacatttacgtttgttttcgaaagt
ataaactatgacatcatcagcacactatcaaagggtacattttctacagagcagtacttt
ggttgtttggctgcaagtaaagaagcagtaaaatctattttctcgttccaaaggaaagca
ctcgagcggggaatgtcattagaaaagaaaacatag
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integrated database retrieval system
