Rhopilema esculentum: 135693674
Help
Entry
135693674 CDS
T09994
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
res
Rhopilema esculentum
Pathway
res03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135693674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135693674
03012 Translation factors [BR:
res03012
]
135693674
Enzymes [BR:
res01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135693674
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135693674
Translation factors [BR:
res03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135693674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
ATPase
nSTAND3
AAA_19
NACHT
NB-ARC
TsaE
AAA_16
RsgA_GTPase
AAA_34
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
135693674
NCBI-ProteinID:
XP_065068282
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MHRGGIRRHSSHNEDGVNDEGNWGGYRGRQRGRGGGRGRRGGRGHPSGLTGKDIGLWYAA
RGKEKRKAHEARERHAVAIDDHDKKNIRSILGKGSDSSESDEEGQFEEKVLQDEEVCFDQ
TVASHAVNNQLVTNLCPTKSSLYNDEKFNEWLQNDLQNRQKSSEKYQVMMEFRKNLPSYK
MKEEILQAMRASQVMVISGETGCGKTTQVAQFILDNAIERGVGSQCHIICTQPRRISAIS
VADRVAAERGERCGEGSVGFQIRLENQLPRTRGSILYCTTGILLRRLVSDPLLREVSHIV
LDEIHERDLFSDFLLIIVKDLLPLRPDIKLVLMSATLNSEMFSDYFHSCPKINIPGFTYP
VQEFYIEDIYEMLSYIPNVSTRNDKAKPWHRRRSRDNEIKKEEERRNLIKYLQNAPNGMH
YSRQTVHSLCNADLESIDFHLISSILRHICNRMEDGAVLIFLPGWDDISKLHDLLRSNPF
FNADRFMILPLHSLMPTKCQQQVFDRPPIGIRKIIIATNIAETSITIDDVVFVINSGKIK
EKTYDTSLNISCLQPVWASKASSKQRRGRAGRVQPGHCFHLYTRLKEESLADYQTPEILR
TPLEELCLQIKILKLGNIEPFLAKALQSPSPESVYNAIRSLTELNALDRNENLTPLGYHL
ANLPVNPKVGKMILFGAIFSCLDPVLTVASSLGFKDPFFIPLGKEKEADAVRKQFANGAK
SDHIMLVNAFSKWAKIRGTRQEKDWCWRSFLSVNTLNMIASMKSQFAGLLHQIGFVDSPS
ADCYQANVHSDNVKLIAAVICAGLYPNVAKVSNPHGPSGMPKFTSNNHGRVQLHPKSVNF
GVKHFECHWMVYHEIMKTSKIFLYDTSLIAPFPLLFFGGKITTGREDFQNVIKIDGWIKF
KASPEIAKLVKELRMKLDELLEQKISNPNLRLMADRSQMNDQGRLLEAIINLITKEEVQR
SC
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgcatagaggaggtataagaagacatagttctcataatgaagatggtgttaatgatgaa
ggaaattggggaggttatagaggaagacaaagaggaagaggtggagggaggggaaggaga
ggcggcagaggtcatccatctggattaactggaaaagatatagggttatggtatgctgca
aggggtaaagaaaaaagaaaggcccatgaagcgagagagagacatgctgtagccattgat
gatcacgataagaagaatataaggtcaattcttggaaagggttcagactcatcagaaagt
gatgaagaaggacagtttgaggaaaaggtacttcaagacgaggaagtttgttttgaccaa
acagttgcatctcatgctgtgaacaatcaattggttacaaatctttgcccgacaaagtct
agtttgtacaatgatgaaaagtttaatgaatggctccaaaatgatcttcaaaacaggcag
aagagtagcgagaagtatcaagtcatgatggaatttaggaagaatcttccttcatacaaa
atgaaagaggaaatattacaagcaatgagagcaagtcaagttatggttataagtggtgaa
acaggatgtggaaagacaacacaggttgcacaattcatcttggataatgctattgaaaga
ggagttggatcacaatgccacataatttgcactcagccaagaagaataagcgctatttcg
gttgccgacagagtggctgccgaaaggggtgaaagatgtggagagggaagtgtggggttt
cagattcgtcttgaaaatcaactaccacgtaccagaggatctatactttattgtactact
gggatcctgttgcggagactcgtatctgaccccttgcttcgtgaagttagccacattgtt
ctggacgagattcatgaaagggatctgttttccgattttctgctcatcattgtgaaagat
cttcttccgctaaggccagacataaaactggtgcttatgagtgccacactcaactctgaa
atgttctcagattattttcattcatgtccgaaaataaacattcctgggtttacataccct
gttcaagagttctacattgaagatatatacgaaatgctgagctatatcccaaatgtttca
actcgaaacgataaagctaaaccatggcatagaagacgatcaagagacaatgaaatcaaa
aaagaggaagaaagaagaaatctaattaaatatttacaaaatgcaccgaatggcatgcac
tattccaggcagactgtacactcactgtgcaatgcagatcttgaatcaatcgattttcat
ttaatctcatccatcttgcgccacatttgcaacagaatggaggatggcgctgttttgata
tttctccctggctgggatgacatttcaaaacttcatgacttgctgcgaagtaacccattc
tttaacgctgatcggttcatgattttgcctttgcactctctgatgccaacaaaatgccag
caacaggtgttcgatcgtccgccgattggaataagaaaaataataattgccacgaatatt
gcggaaaccagcattacaattgatgatgttgtttttgttatcaattccgggaagattaaa
gagaaaacctacgacacatcattaaacatatcatgtcttcagcccgtatgggcaagcaaa
gcttcatcaaaacagcgaagaggaagagctggaagggtgcagcctggccactgttttcac
ctttatacacgtctgaaagaagagtcgttggccgactaccaaacgcccgaaattttgaga
acgcctttggaggagctttgcttgcaaattaaaattcttaaactcggtaatatcgaacca
ttcctggcaaaagctctacaatcgccctctccagaatcagtgtacaacgccattcgctcg
cttacagaattgaatgccctcgacagaaacgaaaacttgacgccactcggctaccatttg
gccaatcttccggtgaacccaaaagttggcaaaatgattctattcggtgcaattttctca
tgtcttgatccagtattaacggttgcctccagcttgggtttcaaggaccctttctttatc
cctttgggcaaagaaaaagaagcagatgctgtacgaaaacaatttgcaaacggagccaag
agcgatcatatcatgcttgtaaacgccttttctaaatgggcaaagattcgtggaacgcgc
caagaaaaagattggtgctggaggagttttctttctgtaaatacgttgaatatgatcgcc
agtatgaagtctcaattcgccggccttttgcaccagatcggtttcgttgattccccaagt
gcagattgctaccaggccaatgtccattcagacaatgtcaagttgattgcagctgttatc
tgcgctggtctctacccaaatgttgccaaagtttcgaatccacacggaccaagcggaatg
ccgaaattcacgtcgaataaccacggcagagttcaattgcacccaaaatctgttaacttt
ggtgtgaagcattttgaatgccattggatggtttaccacgaaatcatgaagacctccaag
atatttctgtatgataccagcctgattgccccgtttcctctgttgttctttggtgggaaa
attacgacaggacgcgaagatttccaaaatgttattaaaattgacgggtggattaagttc
aaggcatcaccggagattgcgaaacttgttaaggagttacgaatgaagctggatgaatta
cttgagcagaaaatttcgaacccaaacttgaggttaatggccgaccgttctcagatgaac
gatcaaggacgacttcttgaggcaattatcaatctaattactaaagaagaagtccagaga
agctgttag
DBGET
integrated database retrieval system
