Rhopilema esculentum: 135693727
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Entry
135693727 CDS
T09994
Name
(RefSeq) exosome complex component CSL4-like isoform X1
KO
K07573
exosome complex component CSL4
Organism
res
Rhopilema esculentum
Pathway
res03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135693727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135693727
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135693727
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
135693727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
135693727
NCBI-ProteinID:
XP_065068353
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MTAMFACVLPLLNSKTSFSLTLKSVTLYSAYHLTNCGIVTLFKMTESFAVPGERLGSLED
YEPGQGTYKRGGFIYSKLVGRKRTSTLQDTSNKRIKISITRLEESSQFVPEIGSPAICKI
VNTTPRFCKAAILSVNGVVLKDVFRGMIRREDVRATEIDKVEMCKSFRPGDIVLAKVLSL
GDAQSYLLTTAENELGVIHAKSEAGLPMLPRSWCEMYCPKTKIIENRKVAKVKVLM
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacagccatgtttgcttgtgtactgcctcttcttaactcaaaaacctccttttcatta
acactcaaaagtgttaccttatattctgcttaccaccttacaaattgtggaatcgtgaca
cttttcaaaatgactgagtcctttgcagtgccgggtgaaagacttggcagtttagaagat
tatgagcctggtcaaggaacgtacaagcgaggaggctttatatattcaaagctggttgga
agaaaaagaaccagcacgttacaagatacatctaacaagagaattaaaatctcgattaca
cgattggaagaatctagtcaatttgtgccagaaataggttctcctgcaatttgcaaaatt
gtaaacacaacaccaagattctgcaaagcagcaattctcagtgtgaatggagttgtttta
aaagatgtgttcagaggaatgatcagaagagaagatgtcagagctactgagatagacaaa
gttgaaatgtgcaaatcttttaggcctggggatattgttttagctaaagtactctcttta
ggagatgcccagtcatacttattgaccactgctgaaaatgaacttggtgtaattcatgca
aaaagtgaagcaggcctgccaatgctgcctagaagttggtgtgagatgtattgcccaaaa
actaagatcatagaaaacagaaaagtggccaaggttaaagttctgatgtaa
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