Rhopilema esculentum: 135693779
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Entry
135693779 CDS
T09994
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
res
Rhopilema esculentum
Pathway
res03013
Nucleocytoplasmic transport
res03015
mRNA surveillance pathway
res03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135693779
09122 Translation
03013 Nucleocytoplasmic transport
135693779
03015 mRNA surveillance pathway
135693779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135693779
03041 Spliceosome [BR:
res03041
]
135693779
Enzymes [BR:
res01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135693779
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135693779
Spliceosome [BR:
res03041
]
Complex C
Other components
EJC/TREX
135693779
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135693779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ResT-TelK_cat
Thioredoxin_6
P-loop_SecA
Dark_CARD
Motif
Other DBs
NCBI-GeneID:
135693779
NCBI-ProteinID:
XP_065068423
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MAEEAENELLDYEEASDNEAPNESTNAIEQAKKEVKGTYVSIHSSGFRDFLLKPELLRAI
VDCGFEHPSEVQHECIPQAILGMDIVSQAKSGMGKTAVFVLATLQQIEPVDNQVLVLVLC
HTRELAFQISREYERFSKYMSTIKVGVFFGGISIKKDEQVLKTNCPHIVVGTPGRILALA
KDRVLNLKHIKHFILDECDKMLEALDMRRDVQEIFKMTPHEKQVMMFSATLSKEIRPVCK
KFMQDPMEVYIDDETKLTLHGLRQHYCKLRDNEKNRKLFDLLDALEFNQVIIFVKSVQRC
MALSGLLTEQNFPAICIHRAMPQEERLSRYKQFKDFQKRILVATNLFGRGMDIERVNIVI
NYDMPEDSDTYLHRVARAGRFGTKGLAISFVSEENDAKVLNDVQDRFEVNVSQLPAEIDM
ATYIEGYEAQR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaagctgagaacgagcttttggattacgaagaggcgagtgacaatgaggca
ccaaatgaatccacgaatgcaattgagcaagccaaaaaagaagtcaaaggaacctacgtc
agtatccacagttcaggattcagagattttctgttgaagccagaacttctgagggccatt
gttgactgcggttttgaacatccatctgaagttcagcatgagtgtattccacaagcaatt
cttggaatggatattgtatcccaggcaaaaagtggaatgggcaaaacagctgtctttgtt
cttgcaactttgcagcaaattgaacctgttgacaatcaagtgctggttttggtcctttgt
catacaagagaacttgcttttcagataagcagagagtatgagcgtttttcaaagtacatg
tctacgatcaaagttggggttttctttggtggaataagcataaagaaggatgaacaagtt
ctgaaaacaaactgcccccatattgtagttggaacacctggtaggatcttggcattggca
aaagacagagttctgaatctcaagcatataaagcattttatccttgatgaatgtgacaag
atgcttgaagcgttggatatgcggagagatgttcaggaaattttcaagatgacaccacat
gaaaaacaagtgatgatgttcagtgcaacactcagcaaagagatcaggcctgtctgcaag
aaattcatgcaggatccaatggaggtatacattgatgatgagaccaagctaaccttgcat
ggactgagacaacattattgtaaactgagggataatgagaaaaacagaaagctctttgat
cttcttgatgctctagagttcaatcaggtgataatatttgttaaatcagttcagcggtgt
atggctctatctgggttactgacagaacagaacttccctgccatttgtattcacagagca
atgccacaggaagaaagactgtctcgatacaagcaattcaaagatttccaaaaaagaatt
ttggtagcaactaacctttttggcagagggatggacattgaaagagtgaacattgtcatt
aactacgatatgccagaagattcagatacatacctacacagggttgcaagagctggtcgt
tttggaacgaaaggtttggcaatctctttcgtgtctgaagagaatgatgctaaagttctc
aatgatgtgcaagatcgatttgaagtaaatgtcagccagctgccagctgaaattgacatg
gcaacgtacattgaggggtatgaagcacaaagataa
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integrated database retrieval system
