Rhopilema esculentum: 135693782
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Entry
135693782 CDS
T09994
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
res
Rhopilema esculentum
Pathway
res03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135693782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135693782
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135693782
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
135693782
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
135693782
NCBI-ProteinID:
XP_065068427
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MDEDEISEVQHFVTPGDIITEDAGFMRGHGTYLNENKLFASVAGVVERVNKLVSVKPLKT
KYTGEVGDVVVGRITEVVQKRWKVDTFSKLDSVLLLSAVNLPGGELRRRSAEDELVMREY
LSEGDLIFAEVQSLYADGSLSLHTRSLKYGKLPQGTLIKVSPSLIKRCKIHVHDLPCGAT
VILGNNGYIWIGPVMSQESDLSLHSSERIEKEISKRDREVIARLRNCISCLAESKVLLYD
TSILYAYEASLKFPVKELLRSDVQDELVDETRANLLQQI
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatgagataagtgaagttcagcactttgtcacaccaggagatataatcact
gaggatgcaggttttatgagaggtcatgggacatatctgaatgaaaataaactgtttgcc
tctgttgctggtgtagttgaaagagtaaataaacttgtctcagttaaaccattgaaaacc
aagtatactggagaagttggtgatgtggtggttggaagaattacagaggttgtacagaag
agatggaaagtagatacattttcaaaacttgattcagttttattactgtctgctgttaat
ttgcctggtggtgagttgagaagaagatctgcggaagatgagctggtgatgagagaatat
ctttcagaaggagacctcatttttgcagaagtgcagtcgctgtatgctgatgggtcattg
tctcttcacacaagaagtttaaaatatggcaagctccctcaaggaactctgataaaggtc
tccccgtcacttataaagcgatgcaaaatacatgtccacgaccttccttgtggtgccacc
gttatccttggcaataatggctacatctggataggcccagttatgtctcaggaaagtgac
ctttcgctgcacagctctgaaagaatagaaaaggaaatttcaaaacgtgacagagaagtc
attgcaagattgcgaaactgcatctcatgtttggcagaaagcaaagtacttttgtatgat
acatcaattctttacgcctatgaggcttcactaaaatttccagtgaaagagttgttacga
tctgatgtccaagatgaactggtagacgaaacaagggctaatctgcttcaacagatctaa
DBGET
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