Rhopilema esculentum: 135693953
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Entry
135693953 CDS
T09994
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
res
Rhopilema esculentum
Pathway
res03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135693953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
res03041
]
135693953
Spliceosome [BR:
res03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
135693953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
PRP4
ANAPC4_WD40
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_like
DSHCT
DUF3727
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
135693953
NCBI-ProteinID:
XP_065068621
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MTSQTGSWLGLKNEFWLSPVRNYLFLKMSLSDDDDDLPLPKKQRIYYGSLEEKVKNIVDG
GDSAPKAIERTEGENDESGSEKGISDDNDDDGDDAITRAIKAGNINISEGETMVMNVEEQ
SERHMELLAEFEKRKRARAIAVPTDDAMVKARLRELGHPICLFGEGPSERRDRLRELLVG
IEDLLSGITDELEEKEKVAESAQEVWYHEGSDALKKARQWIAEYSLPRAKERLRKAKMQT
TKTESEKAAKEQEIRKKTSALTNFCSQIGDDRPLSFGKFSPNGEMLATSSWSGLCKLWSV
PDGKLIRTLRGHNERVGAIIFHPRATLDLDTSAPCMVSCGSDGSVLLWNLESDTPIANIE
GHEERVSRVAFHPSGRFLGTACFDRSWRLWDLEQQKEILHQEGHSRECFDIKFQVDGSLA
ASCGFDARGMLWDLRTGRCILGLDGHLKKVLSIDFSPNGYQLVSGSEDQKAMVWDLRQQK
TIYTIPAHTNLVSHVLFNDTFIATCSYDNSAKIWSHPGWTPLRTLLGHEQKVTSVDASPD
GKYLATTSFDRTFKLWAADYLV
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgcaaactggctcgtggttaggcctaaagaacgaattttggttgtctcctgtg
cgaaattatttgtttttaaagatgtctctttcagatgacgatgatgatcttccgcttccg
aagaagcagagaatttattatggaagcttggaagagaaagtgaaaaatattgttgatgga
ggtgacagtgcaccaaaggccatagagagaactgaaggcgaaaatgatgaaagtggctcc
gagaaaggaatcagcgatgacaatgatgatgatggggatgatgccattacacgagccatc
aaagcgggaaacatcaacatttctgagggggaaactatggtgatgaatgttgaagaacaa
agtgaaagacatatggaactgttagcagaatttgaaaaacgaaagcgagcacgagcaatt
gctgttccaactgatgacgctatggtaaaagcaagacttagagagcttggtcatcctatt
tgtttgtttggtgaaggaccatcagaaaggagagataggctgagagagcttcttgtcgga
atagaggacttactttcgggtatcacagatgaacttgaagagaaagaaaaagtggctgag
agtgcccaagaggtttggtatcatgaaggatctgatgctctgaaaaaggcaaggcaatgg
atagctgaatactcacttccaagagcaaaagagcgtctgagaaaagccaaaatgcagact
acaaagacagaatctgagaaagcagcaaaggaacaggaaataaggaaaaaaacttcggcg
ttgacaaacttctgcagtcaaattggagacgacagaccactttcgtttggcaagttttcc
ccaaatggagaaatgctagctacctcatcgtggagtggcttatgtaaactgtggtcagta
ccggatggaaaactcattagaactctgagaggccacaacgagagagtgggtgctattata
ttccacccaagagccacgctggatcttgatacatcagcaccctgtatggtctcttgcggt
agtgacggcagtgttttgctttggaatcttgaaagtgatacgccaatagcaaacattgaa
ggacacgaggaaagggtatctcgagttgcgtttcatccaagtggccgtttcctcggtacc
gcttgttttgatagatcttggcgactttgggacttagaacaacaaaaagaaatacttcac
caggaaggacattcaagagaatgcttcgatattaaatttcaagtcgatggttccttggct
gcatcatgtggattcgatgcacgtggtatgctatgggacctcaggactggtcgatgtatc
cttggtttagatggccatctgaaaaaggtgctttccattgatttctctcccaatgggtac
cagctagttagcgggagtgaagaccaaaaagcaatggtatgggacttacgacagcaaaag
acaatctacactattccggcccatactaatttggtatcgcatgtcctgttcaacgatacg
ttcatagctacgtgttcctacgacaatagtgcaaagatctggtctcaccccgggtggaca
ccacttcggacgctgttagggcacgagcaaaaagtaacttcggttgatgcctcgccagat
ggcaaatatttggccactacttcatttgatcgaaccttcaaactttgggcagctgattat
cttgtgtga
DBGET
integrated database retrieval system
