Rhopilema esculentum: 135694185
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Entry
135694185 CDS
T09994
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
res
Rhopilema esculentum
Brite
KEGG Orthology (KO) [BR:
res00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
res03036
]
135694185
Chromosome and associated proteins [BR:
res03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
135694185
microRNA pathway
RISC loading complex
135694185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
ResIII
Helicase_C
Dicer_platform
Dicer_dsRBD
PAZ
Dicer_PBD
dsrm
WIV_dom_3
Cas3-like_C_2
CT0912-like_C
Motif
Other DBs
NCBI-GeneID:
135694185
NCBI-ProteinID:
XP_065068958
LinkDB
All DBs
Position
Unknown
AA seq
1500 aa
AA seq
DB search
MMASDNGDASSDFLPRDYQIEIFEEACRQNVVVCLGTGTGKTFISVLLIKELAHQIKGKL
SEGGKRTFFLVTTVPLVHQQSKAIEDRTFLKVGKYTGDMGVDFWDKEDWKKEFNAHDVLV
MTHQILLDMLQHNYLLPSNINLLVLDECHHTNKNHPYAQIMKRIEDFSIKPRVMGLTASI
INEKVKNKGISLRHHLEERMKELEINLRAVCFTCADQSSTSSYATKPKESIKGYPDLEFD
DSQFYQIYTQISDLLKFNGEMPNSKEEKEAYKKCVNALRDLQEILDFLGGWCTYKAAIVI
KENIEKEKDSFHRIGSEWLDYVVQIAEDIIHLFEHYAVSQFGGIESILLMMPLITPKVMT
LMDLLVDNKKDLCAIVFVKKRITAHVLSDLINNLVTCYEHYEGIVSDFVYGHNLVGIFTQ
KELCSMTSKNQEKILRRFRSMEFNVLVATSVVEEGLDVRKCNLVVRFDGLQNYREYVQSK
GRARAKNSKFVILSRQEEIESTEYQLERMREVEQILIEKSRGRELPTEEEIAEYRVAEQL
IEPFRISDEEGAAEINRNNAMQLLHIYCSKLPSGQYTSLRPTFKIQKHADYGEFMAIVSL
PINCPVRETIEGDWLPTEKLARISAAKEACVRLWKAKELDDYFVPIKRNYESDETDEDED
EVVHAGSACMSTPFVYQRKIPDCFEFEGPFPSSGLYLYALEIVLEKPKTGQESLWNIWYR
ENRRQYGLLVARPLPKVPCFPLFTQAGEVRVSVKLQEGDVCLDRLELECVKSFHKSAMTM
FAGDFASGRSFSLDNAKSKALLVVLASDSHSLTKRKKQLFDCKFMSEVCDDHFYPADGDL
DDAVISKTYLGDRKSLYYVAAVRNDILITDRIAAGKVTFEEYYRNKYGKIISQEQPLLQS
VHASTRINYTAPRYSSKEWNSSKSASVEFLVPELCQRKRIPASFHCQSVCVPSLLFRLET
LLAAEELRQLMIRDISPSHLNCRCVNKKERECFDEIMRKPKKKRGGVCRYDTNFEREFEN
LKLDDACGNLGELLHGKNHGRDKCVKLEVVLQSLTTAKANAGFDLERLETLGDSFLKVAT
SIYLFYKYPMKYEGRLTEKRKQLVCNKKLLKVAKQKDLQHVMCNTSFGVKLTGKDEDTVY
DHAKTLWLPPMFAEVLSHSSSEEEKVPVAPCHIIRDKSLADAIEALIGAFLEHDGVNGAL
KLMQWFGIDCFRSSLTLMPAPNCNSAYADFDLPHAAIYEENAENRAFVTRQYKKMRLSAV
EKTINYEFKDKSFLVQAFTHMSYHLNKVTGCYQRLEFLGDAVLDFLIVGHLCSNNGDLDP
SSLTDIKSALVNNNTFALLSLKYRLHKGLMRLESKLDSVLSRFGDLTKEEINDNFKSPFM
IRLTSDDDPDEGYHAPKVLGDIFESLAGAVFLDSGLDFLQVWRVFYPILKPLIDAYVENV
PLNPVRAIKEKYPQASYRFENMTNGKCMCFWRIDEKEFYGIGQNRKMAQGAAAQKALLEV
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatcggacaatggtgatgcttcaagtgacttcttacctagagattatcagatt
gaaatctttgaagaagcttgccggcaaaatgtagttgtttgtcttggcactggcactggt
aagacattcatcagcgtgttgctgatcaaagagctggctcatcaaatcaaaggaaaactt
agtgaagggggcaaaaggacgtttttcctggtcaccacagttcctttagtacatcaacaa
agcaaagcaattgaagacaggacattccttaaggtaggtaaatatacaggagacatgggt
gttgacttctgggacaaggaagactggaagaaggaattcaatgcgcacgatgttctggta
atgacacatcagatattgcttgatatgcttcaacataattacttgctaccatcgaatatc
aatctgctagtactggatgaatgtcaccatactaataaaaaccacccgtatgcgcagatc
atgaaacgaatcgaagattttagcatcaaaccccgcgttatgggtttaacagcctctatc
ataaatgaaaaggtcaagaataaaggcatctcacttcgacaccatctagaagaaagaatg
aaggaacttgagataaacctacgagcagtatgctttacgtgtgcagatcaatcttctaca
tcgtcatatgcaacaaagccaaaggaaagtataaaaggatatcctgacctggaatttgat
gactctcagttctatcagatatacacacaaatctcagatcttcttaaatttaacggagaa
atgccaaatagcaaagaggaaaaggaggcttacaaaaaatgtgtaaatgcccttagagat
ctacaagaaattttagacttccttggaggatggtgcacttacaaagctgcaattgttatc
aaagaaaatattgaaaaggagaaagatagctttcatcgtattgggtcggagtggctcgat
tatgtggttcaaatagcagaggacattattcatttgtttgagcactatgcagtgtctcaa
tttgggggcattgaaagtattttgctcatgatgcccttaatcaccccaaaagttatgaca
ctgatggacttgctggttgataataagaaagatctctgtgcgattgtgtttgtgaaaaag
cgaatcactgctcacgttttgagtgatctcatcaacaacttagtgacgtgctatgagcat
tatgaaggcatcgtcagtgattttgtatacggacataatttggtgggtatcttcacccaa
aaggagttgtgctcaatgacgtcaaagaaccaagagaaaatcctgcggagatttcgaagc
atggaattcaatgtgcttgttgcgacgagtgttgtggaggaggggctcgatgttcgcaag
tgtaacctcgtcgtgagattcgatggtctacagaattatagggaatacgtacaatcaaag
ggaagagcacgggcaaaaaattctaaatttgtcatattatcaagacaagaggagattgaa
tcaacagaatatcagcttgagagaatgcgagaggttgaacaaattttaatcgaaaaaagc
agaggtcgtgaattaccaaccgaagaagaaattgcagaatacagagttgcagagcagctc
atcgagccctttaggatttctgacgaggaaggggcggcagaaataaatcgaaacaatgcg
atgcagctactgcacatttattgttcgaagcttccttcgggtcagtatacatctctgaga
ccgacctttaaaattcaaaaacacgctgattatggtgaattcatggctattgtcagttta
ccgataaactgtcctgtgagagaaacaatcgagggcgattggcttccaaccgaaaaacta
gcaagaatctctgcggcaaaagaggcgtgtgttcgtctttggaaggctaaagaacttgat
gactatttcgtaccaattaaaagaaactacgaatctgacgaaaccgatgaagatgaggat
gaagttgtgcatgctggaagtgcctgtatgagtacgccatttgtttatcaaagaaagatc
ccagactgttttgagttcgaaggaccttttccttcatctggcttatatctctatgctttg
gagatagttctggagaaaccaaagactggtcaagagtctttatggaatatctggtatcgt
gaaaatcgtcgacaatatggcttacttgttgccaggccattaccaaaggtaccgtgcttc
ccgctgtttacccaggctggagaagtcagagtaagtgtaaaactacaagagggcgatgtc
tgcctggaccgtctggagcttgaatgcgtgaagagtttccataaatcagcaatgacgatg
tttgctggtgattttgcatctgggagatctttttcccttgataatgctaagtcaaaggct
cttcttgttgttcttgcaagtgactctcattcgcttacaaaaagaaagaagcagctgttc
gattgcaagtttatgagtgaagtatgtgacgatcatttctatcctgcagatggggacctc
gatgatgcagtgataagcaagacctacctcggagacaggaaaagcctgtattatgttgct
gcagttagaaacgatatattgatcacagatagaattgcagctggcaaggtaacatttgaa
gaatactatagaaacaaatacggaaagattatcagtcaagagcaaccgttgttgcagtct
gtccatgcaagtacaaggatcaattacactgcccctaggtatagcagcaaagagtggaac
agctcaaaaagcgcatctgtcgagttcttggtaccagagctttgtcagcggaaacggatt
cctgctagcttccactgtcaatcagtgtgcgtgccatcactcctttttaggctcgagacg
cttcttgctgccgaagaattaagacagctgatgattcgagatatctctccttcgcatttg
aattgccgctgtgtcaataaaaaggagagggaatgttttgatgagataatgcgaaaaccg
aaaaagaaaagaggcggtgtttgcaggtatgatacaaattttgagcgtgaatttgaaaat
ttaaagctggatgatgcatgtggaaatcttggtgaattattgcacggaaaaaaccatggc
agagacaaatgcgtcaaattagaggtggtcctacaatcgctaacaactgccaaagcaaac
gctggctttgacttggagagactggagacccttggtgattcttttctgaaggttgcaaca
tctatctacctgttctacaaatacccgatgaagtacgaaggaaggttgacagaaaaacgt
aagcagcttgtttgcaataaaaagctgttgaaagtggcaaagcagaaagatttgcagcac
gttatgtgcaatacgtcatttggtgtgaagcttacaggaaaggatgaggatacggtgtat
gaccatgccaaaactctttggttgcctccaatgttcgcagaggtcttaagccattcatct
agtgaggaagaaaaggtccctgtcgctccttgtcacattatcagagacaaatcattagca
gatgccattgaagctctcataggcgcatttttggagcacgatggagtaaatggtgcgcta
aagttgatgcagtggtttggaattgactgtttccgcagctctctaacgcttatgcctgct
ccaaattgtaacagcgcgtatgctgattttgatctgcctcatgcagcaatctacgaagaa
aatgcggaaaaccgagcctttgtcacaagacagtacaaaaaaatgagactttctgctgtt
gaaaaaacgataaattatgagtttaaagataaatcgtttttggtgcaggcctttacgcat
atgtcatatcatttaaacaaagtcacgggctgctatcaacggctggaattccttggtgat
gctgtattggacttcctgatcgtagggcacctatgctctaacaatggagacctagaccca
agcagtttaacagacatcaaatcagcactggtgaataacaacacatttgccctgctctca
ctcaaatatcgtcttcataaaggtttgatgaggctggagtcaaaacttgattcagtgttg
agcaggttcggtgacctcacgaaagaagaaataaatgataattttaagagcccattcatg
attcgactgacgtctgacgatgatccagacgaaggctatcatgcacctaaagtacttggg
gacatctttgagtcattggcaggggcagtgtttcttgacagtggtcttgactttctgcaa
gtatggagagttttttatcccatactgaagccgttaattgatgcctacgtggaaaacgtg
cctttaaatccagtaagagcaattaaagagaaatacccacaagcctcctacaggtttgaa
aacatgacaaatggaaagtgcatgtgtttttggcggattgacgaaaaggaattttacggc
atcggacaaaaccgaaaaatggcacaaggagctgccgctcaaaaggctttgctcgaagtt
tga
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integrated database retrieval system
