Rhopilema esculentum: 135694524
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Entry
135694524 CDS
T09994
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
res
Rhopilema esculentum
Pathway
res03018
RNA degradation
res03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135694524
09123 Folding, sorting and degradation
03018 RNA degradation
135694524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135694524
03041 Spliceosome [BR:
res03041
]
135694524
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135694524
mRNA degradation factors
5'-3' decay
Lsm complex
135694524
Spliceosome [BR:
res03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135694524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
135694524
NCBI-ProteinID:
XP_065069376
LinkDB
All DBs
Position
Unknown
AA seq
129 aa
AA seq
DB search
MVLPISLLKKAHNHPMLVELKNGETYNGHLVACDNWMNINLREVICTSRDGEQFWRMPEC
YVRGSTIKYMRIPDEVIDLVKEDIQERSKSQARGGGRGGGRGGGRGGGGRGRGDKARRGG
RKDEGKVDR
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcccaatctcattgttgaaaaaggcccataaccatccaatgcttgttgagttg
aaaaatggagaaacatacaatggacatcttgtagcatgtgacaactggatgaatatcaat
ctgcgagaagttatttgtacatcaagggatggtgaacagttttggaggatgcctgaatgc
tatgtacgtggcagtacaataaaatacatgagaattccagatgaggtaattgatttggta
aaagaagatatccaggagagatcaaagtcacaagcgcgaggtggtggacgtggcggtgga
cgtggtggtggccgcggcggtggaggacgtggaagaggtgataaggcacgccgaggtggt
agaaaagacgagggcaaagtcgatcgatag
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