Rhopilema esculentum: 135694923
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Entry
135694923 CDS
T09994
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
res
Rhopilema esculentum
Pathway
res03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135694923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
res03009
]
135694923
Ribosome biogenesis [BR:
res03009
]
Eukaryotic type
Pre-60S particles
RNases
135694923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
KIX_2
Rieske
MAGI_u1
Med15_N
Motif
Other DBs
NCBI-GeneID:
135694923
NCBI-ProteinID:
XP_065069882
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MFPTAGYFRNVPCPFYVHGLCHRPYCHFRHSKPDTKGKRGNSSDWTYGELVEEESHESKS
STAEEELMDIIKNLSPGSKQANASSKKSVTFAFPSHGQQTVKEEGKKETTEVTKKKKERS
ALKKELDKDPIPAPIIKEISDLLKITSSNDQSSKIAEELRKRKKCKKDTEEATVEVTETR
EEEEKGNITDADNIFDIIEEDIPKKPPKLKDIDFFEAEVVTGETKKRKISGSKGKQNLVS
DQQDSSVESSSESVDNSEDTLRQIFEECDPLVAHDLAKENTISVKATSKEASSTSMGKVR
ETVGLGSLKKRIAHNPNVEAVRQPVVMKGLKKNTTMKPSFVSPSICNTSKLQSTAKMASN
SGIEPVSKRMSFTSNDGTYIGKKRKAHTLEINEEPSVLKATVPAKKPRIPVEFGSKVPQV
IRQRYLDKIIEEYTDKYSSLGEVYEKAVEEEKLIYTRCSSRQIYMNLCVNAIKKIRELPK
YKVIKNGSHRSLAPKLLPDNSSKMAAELASSIVPPKLVIRPSSISLSRVDKKHSSLTGGS
ADRQRKTSISSIADLTVELPTCLPVEKEDKFQNTENENRFGLVLIKRRNPVYYLSEDIFY
DCVQKYVASDQDLWNNNYPRESTDTPGRALYRETKGSLHATKRTCARCGNPFLLNSEGEY
VVKAECTYHWGKMRRFRGKGGVLTQFSCCQGDSGSLGCSVAKLHVADYFGDLDGYVATKA
HNKTNTRKVYALDCEMCYTSHGLELTRITIVDFSMKQVLDAYVKPEREIIDYNTRFSGVT
EKDLEGVEISLNDVHRKLLKKFGTDTVLIGHSLESDLRALKLIHNKIVDTALIFPHRLGL
PYKRALKTLMGEFLQKIIQDSDGGHDSYEDAGACMELMKWKIMEDLKKQARTTSAHVR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgttcccaactgctggttactttagaaatgttccttgccctttctacgtccatggctta
tgccacagaccttactgccattttcggcattcaaaaccagatacaaaaggaaagagaggg
aacagtagtgactggacttatggagaattggttgaagaggaaagtcacgaaagtaaatct
agcacagcagaagaagagttaatggacatcataaaaaacctgtcacctggatctaaacaa
gcaaatgcttcctctaaaaagtcagtgacatttgctttccctagtcatggccaacaaact
gtaaaggaagaaggcaagaaagaaacaactgaagtaacaaagaaaaagaaggaaaggagt
gcacttaaaaaggaacttgataaggacccaatacctgcaccgataattaaggaaatttca
gatttgttaaagatcacaagctcaaatgatcaatcctcaaagattgcagaagagctaagg
aagagaaaaaaatgcaaaaaggacactgaagaagcaacagtagaagttacggaaacccga
gaagaagaggaaaaaggaaatattactgatgctgacaatatattcgatatcatcgaggaa
gatatacctaaaaagccccccaaattaaaggacatagatttctttgaagctgaagttgtg
accggagaaacaaaaaaaagaaagataagtggcagtaaaggaaaacaaaacttagtttcc
gaccagcaagattcttctgtggaatcttcaagtgaatctgtggacaacagcgaagacact
ttaagacaaatttttgaagagtgtgatccacttgtagctcatgacttggctaaggaaaac
acaatttcagttaaggcaacaagcaaagaagccagcagcacatcgatgggtaaagttaga
gaaactgttgggcttggaagcctaaagaaaagaatcgcgcataatccaaatgtggaggct
gttcgccaaccagttgtcatgaaagggctcaagaaaaataccaccatgaaaccatcattt
gtgtcacctagcatatgcaacacatcgaaacttcaatcaactgcgaagatggcatcaaac
agtggtattgagccagtaagcaaacgcatgtcttttaccagcaatgatggaacttacatt
ggcaagaaaagaaaggcccatactctagaaataaacgaagagcctagtgtactgaaggcc
acggttcccgcgaaaaagccaagaattcctgtagagtttggctcaaaagtaccgcaggtt
ataaggcagcgatatctagataaaattattgaagaatatactgataaatacagttcattg
ggggaggtctatgaaaaggccgtagaagaggagaagctaatttacacacgctgctcaagt
cgtcaaatctatatgaatctttgcgtcaatgccatcaagaagattcgtgaattaccaaag
tacaaagttatcaagaatggtagccacagaagtttggcgccaaagttattgccggataac
tcatccaaaatggctgctgaacttgcgtcatcgattgtcccgccaaagcttgtaataagg
ccatcttcaatttcactgtccagagttgataagaagcatagctcattaacgggtggttct
gcggacagacaaaggaaaacatcaatctccagcattgccgatctcactgtggaactgcct
acctgtttgccggtagaaaaagaggataaatttcaaaacacagaaaatgaaaaccgattt
ggacttgttcttataaaacgaagaaacccagtttattatttatccgaggatattttttac
gactgcgtgcagaaatacgtcgcttcagatcaagacctttggaataacaattaccccagg
gaatccacagacacccctggtcgggctctgtacagggagaccaaaggatctttgcacgct
acgaaacgaacttgcgcacggtgtggaaacccttttctgttgaactcagaaggagaatac
gtagtcaaggctgaatgtacttatcattggggcaagatgcgaagatttagaggtaaaggt
ggagttcttacccagttttcttgttgtcaaggtgattcaggtagtcttggctgctctgtg
gcaaagctgcatgtagccgactacttcggagaccttgatggttacgtggctacgaaggcg
cacaataaaacaaacacacggaaagtgtacgcacttgattgtgaaatgtgttacacgtca
catggtctagaattaacaagaataacaatcgttgacttcagtatgaaacaagtgttagac
gcttatgtaaagcccgaaagagaaataattgattataatacacggtttagcggtgttact
gaaaaggaccttgaaggtgtcgaaatatccttaaacgatgtgcatagaaaactgctgaag
aagttcggaacagacacagtcctgataggccatagcttagaaagcgatctccgtgctttg
aagcttatacataataagatagttgatacagctttgatatttccgcatcgcctgggactt
ccttacaaacgagcgctaaagaccttgatgggtgaatttttacaaaagatcatacaagac
agtgatgggggccatgatagttatgaagatgcaggagcttgtatggaactaatgaagtgg
aagattatggaagatttgaagaagcaagcaagaacaactagtgcccatgttaggtga
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