Rhopilema esculentum: 135695024
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Entry
135695024 CDS
T09994
Name
(RefSeq) nucleoporin NDC1-like
KO
K14315
nucleoporin NDC1
Organism
res
Rhopilema esculentum
Pathway
res03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135695024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135695024
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135695024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
135695024
NCBI-ProteinID:
XP_065070034
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MAALSGGSWETNFQSFYNWKQTLETEKWSKKFRKIDDNQELKWRTGAATFWAMAFMPFIV
GLLHLTSSFRIFSPLLWIEDAITKVLSGWFLASVLVIQVLCIPLLLVHLKCTKVQVVPLE
TRWKQILFILHPRQLIWILAIATDCLILTIIFMSLIYDSIATNLCKNESKCISLFRNSML
FYGVLCGVRYGIVYFKDSNYVIQFPVIQEKRFFRTRAILPSCFKNSLISAVQSLKVFYIL
NILVGLSFGLLINVFSGYESMYSFALNALSIMNFSFVWLCMVIGTAIAMILNIAECLFKI
FITQSYSFLLEKDFISDHRLLLQEALLSNNQVLKHLGFLDLCHIGKFDEKRRRSIFAISL
PGGHPENWNLVLSQYLTAIEESVKKFHEAYSQEVKIRQTNVKSPFLASPSPSSVPAVTSP
KTFPSTKTASLFSPVKYWDSTEDVSEINKKPRAGYKDHKQILTQKKATLLSWLFEERPDY
KKESLFQDQQLVLWALEGLSTLITASFSEDAYGVVQRMLPDILIILMSYQETIEKFLQTS
IADDKMQVNKLKDFQKKKAATGIAQSYKLAVQTAIYRITSKFGCHLDSVRIPREYRRRLD
AFIEFRE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttgagtggtggaagttgggaaaccaactttcagtcattttacaactggaag
cagacacttgaaactgagaagtggagcaaaaaattccgaaaaatagatgataaccaggaa
ctgaaatggagaactggagcagcaactttctgggcaatggcttttatgccctttatagta
ggacttcttcatttgacatccagtttcagaatctttagccccttgctttggattgaagat
gctatcactaaagtgctctcaggctggttccttgcttctgtactagtgatccaagtttta
tgcatccctctactgcttgtccatttgaaatgcacaaaggttcaagttgttcctttggag
actagatggaagcaaattctgttcattttgcacccaagacagttgatctggatattggct
atagccacagactgcctcattctaacaataatcttcatgagtttgatatatgacagcatt
gcaacaaacctatgtaaaaatgaatctaagtgcatcagtcttttcagaaattctatgctt
ttctatggtgttctttgtggtgtcaggtacggaattgtgtatttcaaagatagcaactat
gtgatacaatttccagtcattcaagaaaaaaggttttttagaacgcgagcaatccttcct
agctgcttcaagaactctctaattagtgcagttcagtctctcaaagtcttctacattttg
aatatactagttggcctcagttttggtcttctcattaacgtcttctctggatatgaaagc
atgtactcattcgccctgaatgccctttcaataatgaatttttcatttgtgtggctttgt
atggttattggtacagcaatagcaatgatattaaacatcgccgagtgcttgttcaagatc
tttattacccagtcatattcattcttgttggaaaaagatttcatcagtgatcatcggttg
ctgcttcaagaagcgttgttgtcaaataaccaagttcttaaacatcttggttttctcgat
ctttgccacatcggaaaatttgatgaaaagcgcaggagatctatttttgcaatttcttta
ccaggaggccatcctgagaactggaatctggtcctatcccagtacctaacagcaatcgag
gaatcagtcaaaaagtttcatgaagcttactcacaggaagtgaaaattaggcagacaaat
gttaaatcgccatttctggcaagtccttctccttcaagtgtgccagctgttacttctcca
aagacatttccatcgacaaaaactgcttctctcttctcaccagtgaaatattgggactca
accgaagatgtttcagagataaacaagaaaccaagagctggatacaaagaccacaagcaa
attttgacgcaaaagaaggcaaccttactgtcatggctgtttgaagagcgtcccgattac
aaaaaagagtccctttttcaagatcaacaattagttctgtgggcccttgaaggtctttca
acactaataacggcatcatttagtgaggatgcatatggtgttgttcagaggatgctacca
gatatcttgattatcctcatgtcctatcaagagacaattgaaaagttcttgcagacttct
atcgctgatgacaaaatgcaagtaaataaactcaaagatttccaaaagaagaaggcggcg
acaggcatagcacagtcatacaaactagccgttcaaactgcaatttacagaattacttcg
aaatttggatgtcatctagactcggttagaattccacgtgaataccgaagacgactagat
gccttcattgaattccgtgaataa
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