Rhopilema esculentum: 135695034
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Entry
135695034 CDS
T09994
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
res
Rhopilema esculentum
Pathway
res03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135695034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
res03019
]
135695034
Messenger RNA biogenesis [BR:
res03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135695034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
135695034
NCBI-ProteinID:
XP_065070043
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MIAKDDRGRQGSVQSKPYSFYIKQENEKISEKNPICDVHGHRSDGRKVEEIRPVHLRTGV
VTQAKGSSYFEKDGVKVICAVYGPRESQRKTEFSTKGRIICDVTFAPFSQPTRQLKAEES
KTKRLSDLLETSLLCAVCLDSFPKSQVEVFVKVLEGSGDVLSGAIISSSLALADAGIEMY
DLVTACSLVYDEDYIALDPTYEEVNQDPLRGCLMLGYLPSLNRISCMIQNGTAATERNIV
FIKKCIEGCIRMHAVMQDCLVNGSLKKEEQQLSSKDLH
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaaaagatgacagaggcaggcagggctccgtccaaagtaaaccatactctttc
tatataaaacaagagaacgaaaagataagcgaaaaaaatccaatctgtgatgtacatgga
cataggtcagatggccggaaggttgaggaaattaggcctgtccacctaagaactggcgtg
gtcacccaagccaaaggctcatcatattttgagaaggatggagtcaaagtaatatgtgca
gtttatggcccaagggagtctcagagaaaaacagaatttagcacgaaagggagaatcatt
tgtgatgtaacttttgcacccttttcacaaccaactcggcagctgaaagctgaagaatca
aagacaaaaaggctttcagatctactggaaacttctttactttgtgctgtctgtttggat
tcatttccaaaatctcaagttgaagtttttgtaaaagtgttagaaggctccggagatgtt
ctttctggggcaataataagttcatctttagcattagctgatgcagggattgaaatgtat
gatttggtaactgcatgttcattagtttatgatgaagactatattgctttagacccaaca
tatgaggaagtcaatcaggatcctttaagaggatgtttgatgttaggatatttgccttcg
cttaacagaatatcttgtatgatccagaatggaacagcggcaactgaaagaaacatagtt
ttcattaaaaagtgcattgaaggttgtatacgaatgcatgcagtgatgcaagattgtttg
gtaaatggctcccttaaaaaagaggagcaacaactctcatcaaaggacttgcattga
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