Rhopilema esculentum: 135695583
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Entry
135695583 CDS
T09994
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
res
Rhopilema esculentum
Pathway
res03022
Basal transcription factors
res03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135695583
09124 Replication and repair
03420 Nucleotide excision repair
135695583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
res03021
]
135695583
03400 DNA repair and recombination proteins [BR:
res03400
]
135695583
Transcription machinery [BR:
res03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
135695583
DNA repair and recombination proteins [BR:
res03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
135695583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DUF6376
Motif
Other DBs
NCBI-GeneID:
135695583
NCBI-ProteinID:
XP_065070784
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MADGKLLLEVKNDVKFKKTEGTLRLLKNKLAWIQKGETVPKFECLYSDIKVQRISPDSSS
KVQLQIMLHDERSSNFHFASPKGRDYQFKQRDEVKNLLAQLIPAHRNKVNREIEEKTKML
KEKPELYQLYKDLVKGGIITAEEFWENRKMGLGITDNGAKQSTGISSGFLAEIKPDTHGC
NELRFNLTADSIEAIFKTYPAVQRKYESSVPHELSEEKFWTDFFRSRHFHRDRYTTTKSS
KDLFGECAERDEEQQLRESIKNIGDPTLDLTNTDADIEEGYGQGMHTPLTTSCTPLIRKF
NHQSLMVLKSSSKRHLDADENESKKSEIKKAKLQDATEYEDLENQATHIVQNLKILDADK
FAPGITKKGNNMDGGEDMLESDAIQSFKFLQKKVTEWQPNLPQVLTHEQACAALSEISPG
SKLVSMSLKGGNAHQLSSSVQSEWKQQYLSLAEVLRHFWSCFPIKSAQLEEKVSRMKSCL
EKFRDTKIADFKSKLPDSNTNLVDHLHQQIDAALEKYNTWQQRRVAR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaaagttgctgctggaagtgaaaaatgatgttaaattcaagaaaaccgaa
ggaacattgcgtcttttaaagaataaactcgcgtggatacaaaagggcgaaactgtgcct
aaattcgaatgtctttactctgacattaaagtgcaaagaataagcccagattctagctca
aaagttcaacttcagattatgctccacgacgaaagatcatcaaattttcattttgcctcg
ccaaagggaagggactatcagttcaaacaaagagatgaagtgaagaatttattggctcag
ctaattccagctcatagaaataaagttaacagagaaattgaagaaaaaaccaagatgcta
aaagagaaaccagaactctaccagttgtacaaagatctcgtaaaaggtggcattataacg
gcagaagaattttgggaaaacagaaaaatgggtcttggaataacagacaatggggcaaag
caatctactggaatttcatcaggatttctagccgaaataaaaccagatacccatgggtgc
aacgaactaaggtttaatctcactgcggacagtattgaggcaatattcaaaacataccca
gcagtacaacgaaaatatgagtcttcagttccccacgagctttcagaggaaaaattctgg
actgattttttccgatctcgacattttcatcgagatcgttatactactacgaaatcgtct
aaagacctgtttggcgagtgtgcagaacgcgacgaagagcagcagcttagagaaagcatt
aagaatataggagacccaacattagatcttacaaatacagatgccgatatagaagagggt
tacggtcaaggaatgcacacaccgctaacaacgagctgtacgccgttgatcaggaaattc
aaccaccagagtctcatggtgctcaaatcgtcatcaaaaagacatcttgatgcagacgaa
aatgaaagcaaaaaatcggagataaagaaagcaaagttacaagatgcaacagagtatgaa
gatctggaaaatcaggctacacatattgttcaaaacttgaagatcttagatgctgacaaa
tttgcacctggaattacaaaaaaggggaataatatggatggcggagaagacatgcttgaa
tcagatgcaatccaaagtttcaaatttttacagaaaaaggttactgaatggcagccaaat
ttgccacaggtcctaacccacgaacaagcctgtgccgcattgtcagagatttcacccggt
agtaaattggttagcatgtccttaaagggcggaaatgctcatcaattgtcatcatcagta
caaagtgaatggaagcaacaatacttatcattagcagaggttttacgtcatttctggtca
tgcttccccatcaaatctgcacaacttgaagagaaggtttcaagaatgaaaagctgcctc
gaaaagttccgcgatacaaaaatagcagattttaagtcaaagctcccggattcaaataca
aatcttgtcgatcatcttcatcaacaaattgatgctgcattagaaaaatacaacacatgg
caacagcgtcgtgtagcacgatga
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integrated database retrieval system
