Rhopilema esculentum: 135695909
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Entry
135695909 CDS
T09994
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
res
Rhopilema esculentum
Pathway
res03020
RNA polymerase
res03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135695909
09124 Replication and repair
03420 Nucleotide excision repair
135695909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
res03021
]
135695909
03400 DNA repair and recombination proteins [BR:
res03400
]
135695909
Enzymes [BR:
res01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135695909
Transcription machinery [BR:
res03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
135695909
DNA repair and recombination proteins [BR:
res03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
135695909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
135695909
NCBI-ProteinID:
XP_065071197
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MMYDMDEDDNYGDDEGDEITTDIWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRI
VEESQQIELEAETSYREQELEPPTKYQLKFEQIYLSKPTHWEKDGAPKAMMPNEARLRNL
TYSAPLYVDVKKTVIRGNQEPETELSNKIYIGKIPIMLRSTYCMLNGLTDRDLTELNECP
LDPGGYFIINGSEKVLIAQEKMATNTVYVFQKKDSKYAYTCEIRSCLEQSSRPTSTLFVS
MVARGGGSAKKSAIGQRIVATIPYIKQEIPIMIVFRALGFVSDRDILEHIIYDFDDQEMM
EMVKPSLDEAFVVQEQNIALNFIGTRGATPGATKEKRIQYAKEILHKEMLPHVGISDFCE
TKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLTKEVKIF
AAKLIDKGKDFKIEHAIKTKTITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST
LSHLRRLNSPIGRDGKLARPRQLHNTLWGMICPAETPEGQAVGLVKNLALMAYISVGSQP
SPILEFLEEWTMENLEEISPSAIKDATKIFVNGCWVGIHRDPEQLIVTLRKLRRQMDIIV
SEVSMVRDITDKEIRIYTDAGRVCRPLLIVENQKLLLKKTHIDKLKEREYENYGWQDLVA
GGVVEYVDVNEEETAMIAMTPDDLDSETYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMDFLKFSELPAGINAIV
AISSYTGYNQEDSVILNASAIDRGLFRSVFYRSYRDSESRRGMDHEEVFERPNRDSCQGM
RNAIYDKLDDDGLIAPGSRVSGDDVIIGKTVTLPEDDDELEGSARRFTKRDASTFLRASE
TGIVDQVMVTINDEGYKFCKIKVRSVRVPQIGDKFASRHGQKGTCGITYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISKLLNEYGY
HLRGNEVLYNGHTGRKINCQIFLGPTYYQRLKHMVDDKIHSRARGPVQILTRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLNERLLAASDPYRVHICNLCGLIAIANLKTNTFECRGC
KNKTQISQIQIPYACKLLFQELMSMSIAPRMMVDVKK
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgatatggatgaagatgataactatggggatgatgaaggagatgaaatcact
acagatatttggcaggaagcatgctggattgttatcagttcatattttgatgaaaaagga
cttgttcgtcaacagcttgattcttttgatgagtttattcaaatgtctgtgcaaagaatt
gtggaggaatcacaacaaattgaattagaggctgaaacatcataccgtgagcaagaacta
gagccaccaaccaaataccagttaaagtttgaacaaatttatctctcaaaaccaacacat
tgggaaaaggatggagctccaaaagccatgatgcctaatgaagcaaggcttagaaattta
acgtactctgccccactatatgttgacgtcaaaaagacagtcattcggggaaatcaggaa
ccagagactgaactcagcaataagatatacattggcaagataccaattatgctacggtca
acatattgcatgctcaatggattaacagatcgtgatcttactgagcttaacgaatgcccg
ttggatcccggtggttactttatcataaatggctcagaaaaggttttgatagcacaagaa
aagatggccacaaacactgtttatgtttttcagaagaaagactcaaaatatgcttacaca
tgtgaaattagatcgtgtttggaacagtcatcacgacccactagcacgctttttgtctct
atggtcgcaaggggtggcggaagtgcaaagaaaagtgcaatcggacaaagaattgttgct
actattccttatataaagcaggagataccaatcatgattgtttttagggctcttggcttt
gtgtcagatagagacatcttagaacatattatatatgactttgacgatcaagaaatgatg
gaaatggtaaaaccgtccttggatgaagcatttgttgtacaagagcaaaacatagcgctg
aatttcattggcaccagaggggctacacccggggccacgaaagaaaagcgaattcaatat
gcgaaagagatcttgcacaaagagatgctgccccacgttggaatcagtgatttttgtgaa
acgaaaaaggcttactttttggggtatatggttcacagacttcttttggcggcactggga
agacgagagctcgacgacagagatcactatggcaacaagcgattggatctcgccggtcct
ttgcttgccttccttttcaggggactgtttcgcaacctcaccaaagaagtcaagatattt
gctgcaaaactcatagacaaaggaaaggattttaaaatcgaacacgcaatcaagacaaaa
acgataacagatggattacgatattcgttggccacagggaactggggagaccaaaagaaa
gcacatcaggcaagagccggtgtctctcaagtgttgaatcgcttgacttttgcatcaaca
ttgtcacatttgagaagactgaattcacctattggacgagatgggaaactagcaagacca
aggcagcttcacaacaccttgtggggaatgatatgtcctgctgaaactccagagggtcaa
gctgtaggccttgtgaagaatcttgccctgatggcatatattagtgttggctcccaacct
agtcccatcttagagtttttagaagaatggactatggaaaatctagaagaaattagtcca
tcggcaattaaagacgccacgaaaatattcgtcaatggatgttgggttggtattcaccgc
gaccctgagcagctgattgtaactttacggaagcttcgaaggcagatggacatcattgtg
tctgaggtatcaatggtgcgtgacatcacagataaagagattcgcatctacactgatgct
ggcagggtttgccgacccttgctcattgtagaaaaccagaaactgctattgaagaaaact
catattgacaaacttaaagagagagaatacgaaaattatggttggcaggacctcgttgct
ggtggcgttgttgagtacgtggatgtgaacgaggaagagaccgccatgatagctatgact
cctgatgacttggactcagaaacctattgctccacctacacccattgcgaaattcaccca
tccatgatcctcggtgtttgtgcctctatcatcccctttccggatcataatcagtcgccg
aggaacacatatcaatcggctatggggaagcaagccatgggggtgtatattaccaatttc
catgttcgaatggacaccctggcccatgtattatactacccacaaaagccattggtcacg
acacgttccatggatttcctgaaattcagcgagctgcctgcaggaataaacgcaatcgtc
gcgatttcatcctacaccggttacaaccaagaagattccgtcattttgaatgcatcagca
atcgacagagggcttttccggtccgtgttttatcgctcctatcgcgattctgaatcacga
agaggcatggatcacgaagaggttttcgaaaggccaaaccgagacagctgccagggaatg
aggaatgcaatttacgacaaactagacgatgatggtctcattgcaccagggtcacgtgtc
agcggagatgacgtcattattggcaaaactgtcaccttgcccgaagatgatgatgagctc
gaaggatcagcaagaagattcacgaagcgagatgccagcacgttcttaagagcaagtgag
accggcattgttgatcaggtcatggtcacaatcaacgatgaaggctacaaattttgcaaa
atcaaggtgcgttcagttcgagtcccacaaattggtgataagtttgctagtcggcatgga
cagaagggaacatgcggaattacgtataggcaagaggacatgccgtttacgtgcgagggg
atcacacctgatattatcatcaatccacatgccattccaagtcgtatgaccattggccat
ttgattgaatgtctgcaaggaaaggtttcagcaaataaaggcgaaattggagacgcgacg
ccattcaacgacgctgtgaacgtgcagaaaatctcaaaacttttaaatgagtacggctat
catttgcgtggaaacgaggtgctgtacaacggacatactggtcgcaaaatcaattgtcaa
attttccttggtcccacttattatcagcgcttgaagcacatggtcgatgacaagattcat
tccagagcgcgtggtccggtgcagattttgacaaggcaacctatggaaggaagatcgagg
gacggtgggttgcgattcggagaaatggagcgtgactgtcaaattgcacacggtgctgcc
cagtttttgaatgagaggcttcttgcagcctcggatccatatagagtgcatatttgcaat
ttatgtggcctaattgcaatcgcaaacctgaagacaaacacgtttgagtgcaggggatgc
aaaaacaaaacacagatatcacagatccaaatcccctacgcttgcaagttgttgttccaa
gaactaatgtccatgtctattgcgccaaggatgatggttgatgttaaaaagtaa
DBGET
integrated database retrieval system
