Rhopilema esculentum: 135696371
Help
Entry
135696371 CDS
T09994
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B-like
KO
K12821
pre-mRNA-processing factor 40
Organism
res
Rhopilema esculentum
Pathway
res03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
res00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135696371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
res03041
]
135696371
Spliceosome [BR:
res03041
]
Complex A
U1 snRNP components
U1 related factors
135696371
Complex B
135696371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
SPOB_ab
Motif
Other DBs
NCBI-GeneID:
135696371
NCBI-ProteinID:
XP_065071818
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
MASGLPPSNAIGQMQATGFLGGPQPPPAGVGPPFPPGLPPPGMQPMGVMPGVPPPGYFTA
YQPALPTGPPQPMGMPPGAPLPATAFVPTVIPPAAAQPFQPAPFNPAMMVGILPMTTMAP
VTKVNDKPAQKEAERKPVAEEEKKVDTKEEKPKKKKKVKKKKTPWSTHQAPDGREYFYNT
ETKQSVWSKPDELKTPGELLLDSCPWKEYKTDTGRPYYHNTETKESKWTIPEELEKIKEQ
IKEEKEKGSEEEEVTDDSEDEKGDKESKESDEKKDSVSSESSAKPSVTEKREYETKEEAK
QAFKDLLKEKGVPSNASWENAMKMIVTDPRYTALTKLNEKKQVFNTYKQQRANEEREEHR
MKLKQAKEDLRHFLETHPKMHSWTRWRKASEMFDGEEIWNAVNEREKRDIYDDVIFYLAK
KEKEDEKKLHAKNREYMLDVFSGISSITYKTLWSEAQEILKDHSTYRDDEDVIRIMSDDK
EDALIAFDNHARELEKEYEEERIREKNRLKRQQRKNREGFLALLDELHKSGYLTSMARWM
DLYPKISADVRFANMLGQPGSTPLDLFKFFVEDLKARYNDEKKIIKEILKDRNFIFEIDT
TYDEFNNVIMDDERCATLDPGNIKFAFNSMHEKAEGREKERLKKEERESKRRESSFKQLL
KQAAPPLEPGDKWESVRSRFSSESIFSQITLESERVRIFKDFMGTIESKSKSKKKSSKKH
KRRSRSSSVSLSEEERSRKKKKRRSRSKTPSSASESEQEVKKKEKKHKKKSKKKKYYTPT
PSGSESEAEEVVKEKSEKSKSKHKSKSREKKEKREKRETVDYDDGKLSESGSEEGETRSP
VPSKKKKTDWDTSSEDEAMLQKRKRELLQKLRASAQQDGDY
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggtttaccaccatctaatgccattggacagatgcaagcaacaggattttta
ggtggacctcagcctccacccgctggtgttggaccaccattcccacccggccttccacct
ccaggtatgcagccaatgggtgtgatgccaggagtgccacctccagggtatttcactgct
tatcaaccagcactgccaactggaccaccccagccaatgggcatgccacctggtgcacca
ttgccagcaacagcgtttgtcccaacagttattcctccagctgctgctcaaccattccag
ccagctccattcaatccagccatgatggtcggtatattgccaatgacgacaatggcaccg
gtaaccaaagttaatgataaaccagctcagaaagaggctgaaagaaaacctgtcgctgag
gaggagaagaaagtcgacacaaaagaagagaagccaaagaagaaaaagaaagttaaaaag
aaaaagacaccttggagcactcatcaagctccagatgggagagagtatttttataacaca
gaaacaaaacaatctgtttggagtaaaccagacgagttaaagacacctggtgagttgctg
ttagactcctgtccatggaaagaatacaaaacggatacgggtaggccgtactatcataac
actgaaaccaaggaatccaaatggacgatccccgaagagcttgagaagatcaaggaacaa
atcaaggaagagaaggaaaaaggatccgaggaagaggaagtaacagatgattctgaagat
gaaaaaggcgacaaggaaagcaaggaatctgacgagaagaaggacagcgtaagctctgaa
agcagcgctaagccatcggtgacggagaaacgggaatatgaaaccaaggaagaggctaag
caagccttcaaggatcttctcaaagaaaagggagtcccaagcaatgcatcatgggaaaat
gccatgaagatgattgtcactgatccacgatataccgcgcttacgaagctaaacgagaag
aagcaagtattcaatacttacaaacagcagagagccaacgaggagagagaggaacatcgc
atgaaactaaaacaagctaaggaagacttgcgtcatttcctggagacacatcccaaaatg
cattcctggacaagatggcggaaagcatcggagatgttcgatggggaagaaatatggaac
gcagttaacgaaagagaaaagagggacatttatgatgatgtaattttctatctggcgaag
aaagaaaaggaggatgagaaaaaactccatgctaaaaacagagaatatatgcttgatgtc
tttagtggcatctcttcgatcacatacaaaacactttggtccgaggctcaagaaatactt
aaagaccattcaacatacagggatgacgaggatgtgattcgaatcatgtcagatgataaa
gaagatgccctaattgcttttgacaaccatgcaagagagctggaaaaggagtatgaagaa
gaacgaattcgggagaaaaatcgtctgaaaagacagcaacggaaaaatagagaaggattt
ctcgcgctgctggacgagcttcacaaatcaggctacctgacgtcaatggccaggtggatg
gacctctacccaaaaataagcgcagacgtgcggtttgcaaacatgctcggccaaccagga
tcgactcctttggacttgtttaaattctttgttgaagatctaaaggcgagatataacgac
gaaaagaaaatcattaaagaaatcctaaaggacagaaacttcattttcgaaatagacaca
acttatgacgaattcaacaatgtgatcatggacgacgaacgctgtgcgactctggaccca
ggaaacataaagtttgcctttaacagcatgcatgagaaagcagaaggaagggaaaaagaa
agactgaagaaggaagaaagagagtcgaaaagaagagaaagctcgttcaagcagctttta
aagcaggcagcgccacctttggagcctggggacaaatgggaaagcgtaagaagccggttt
tcaagtgaatcgatattctcacaaataactttagagtcagaacgggtccgtattttcaaa
gactttatgggcacgatcgaaagtaaatcaaaatcaaagaaaaaatcatcgaaaaagcac
aaaaggaggtcgagatcatcatcggtctcgctttccgaagaagaacgatccagaaagaaa
aagaaacgaaggtcaagatccaaaactccatcgtcagcgtcagaatcagaacaagaagtg
aaaaagaaagaaaagaagcacaagaagaaaagcaagaagaaaaagtattacactcctaca
ccatctggatccgagtcggaagcagaggaggtcgttaaggaaaaaagtgaaaagagtaaa
tcgaagcataagtcaaaatcaagagaaaagaaagaaaaaagggagaagcgagagacggta
gattatgacgatgggaagttgagtgagtcaggaagtgaagaaggggaaactcgctcgcct
gtcccatctaagaagaaaaagactgactgggacacatcgagtgaagacgaggctatgcta
cagaagagaaaacgagagttgctgcaaaaactaagagcctcggcacagcaggatggcgat
tattga
DBGET
integrated database retrieval system
