Rhizobium etli CFN 42: RHE_CH00005
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Entry
RHE_CH00005 CDS
T00317
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon chain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret03030
DNA replication
ret03430
Mismatch repair
ret03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHE_CH00005 (dnaQ)
03430 Mismatch repair
RHE_CH00005 (dnaQ)
03440 Homologous recombination
RHE_CH00005 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ret03032
]
RHE_CH00005 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ret03400
]
RHE_CH00005 (dnaQ)
Enzymes [BR:
ret01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHE_CH00005 (dnaQ)
DNA replication proteins [BR:
ret03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHE_CH00005 (dnaQ)
DNA repair and recombination proteins [BR:
ret03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHE_CH00005 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABC88839
UniProt:
Q2KE97
LinkDB
All DBs
Position
3379..4101
Genome browser
AA seq
240 aa
AA seq
DB search
MREIIFDTETTGLDNRADRIIEIGGIELFNHFPTGNTLHIYINPGDQKVHPDALAVHGIT
DEFLKDKKPFAAVADEILAFFGDGKWIAHNATFDMGFINAEFARIGLPPILPDKVIDTLS
MARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIEMIGGRQAAFGLSISG
QPGQAARGEMAMEDDMAFAAALERPRPLGSRLSRSEAQAHEALVAKLGEKGIWAKYASSN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcatcttcgatacggaaaccaccggcctcgataaccgtgccgaccgtatc
atcgaaatcggcggcatcgagctcttcaaccattttccgaccggcaatacgctgcatatc
tacatcaatccgggagaccagaaggtccatccggatgcactcgcggtacacggcattacc
gatgaattcctgaaggacaaaaagcctttcgccgcggttgccgacgaaatcctcgccttc
ttcggcgacggcaaatggatcgctcataacgcgaccttcgatatgggctttatcaacgcc
gaatttgcgcgcattggtttgcccccgatcctgccggacaaggtcatcgatacgctgtcg
atggcgcggcgcaagcacccgatgggaccgaattcgctcgacgcgctctgccggcgttac
ggcatcgacaactcgcaccgtaccaaacacggcgcgctgctcgactccgaactattggcc
gaagtctatatcgagatgatcggcggcagacaggcagcgttcggcctgagcatatcgggt
caacccggccaggcggcccgcggtgaaatggcgatggaagacgatatggcgtttgccgcg
gcgctcgaacgccctcgtccgcttggctcccgtctcagccgatctgaagcgcaggcccat
gaggcgctggtcgccaagctcggcgaaaagggcatctgggcgaagtacgccagctcgaat
tga
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