Rhizobium etli CFN 42: RHE_CH00082
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Entry
RHE_CH00082 CDS
T00317
Name
(GenBank) probable sugar ABC transporter, substrate-binding protein
KO
K25676
pectin-derived oligosaccharide transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH00082
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Pectin-derived oligosaccharide transporter
RHE_CH00082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
ABC88908
RhizoBase:
RHE_CH00082
UniProt:
Q2KE28
LinkDB
All DBs
Position
89079..90365
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AA seq
428 aa
AA seq
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MTLRVNRRNFVAGGAALLSLSALGTSALAQEKRLRLLWWGSQPRADRTNKVSQLYQTKNP
GTSITGEFLGWGDYWPRLATQVAGRNAPDVIQMDYRYIVQYARRGALAPLESYMPAKLNL
DDFDKAQIEGGSVDGHLYGVSLGANSAATVLNTTAFKEAGVDLPTQATTWDEFARMGAEI
TKAGKRKGMFGIADGSGAEPLFENWLRQRGKALYTADGKIGFGVEDASEWYDMWAKFREA
GACVPADIQALDKNDIETNTVSLGKSAAGFAHSNQFVAYQAMNKDKLALTNYMRVKPDSK
GGHYRKPSMFFSVSAQSKAIDLAVDYVNFFVKNPEAVLLLDVERGIPESAAMREVVATKL
DENGKVALAYVSGLGDLAGKLPPPPPAGAGEGELMLRNIAEQVGFGQLSPADGGKQLVTE
ITQILARG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgactctgcgtgtaaacagacgtaatttcgtggccggaggcgcagcacttctgtcgctc
tcggcgctcggcaccagcgccttggcccaggaaaagcgcctgcgtctcctgtggtggggc
tcgcagccgcgcgccgaccgaaccaacaaggtgtcgcagctctatcagaccaagaatccc
ggcacgtcgatcaccggcgagttcctcggctggggcgactactggccgcgccttgcgacc
caggtcgcgggccgcaatgcgcccgacgtcatccagatggactatcgttatatcgtccaa
tatgcacggcgtggcgcgctcgccccgctcgaatcctatatgccggccaagctcaatctc
gacgatttcgacaaggcccagatcgagggcggcagcgtcgacggccatctctatggcgtc
agcctcggcgccaattccgccgcgacggtgctcaacaccaccgccttcaaggaggccggc
gtcgatctgccgacgcaggcgaccacctgggatgaattcgcccggatgggtgcggagatc
acgaaggccggtaagcgcaagggcatgttcggtatagccgacggcagcggcgctgaaccg
ctgttcgagaactggctgcgtcaacgcggcaaggcgctctataccgccgacggcaagatc
ggcttcggtgtggaggatgcatcggaatggtacgacatgtgggccaagttccgtgaggcg
ggcgcctgcgttcccgccgatattcaggctctcgacaagaatgatatcgaaaccaacacg
gtttcgctcggcaaatcggccgccggtttcgcccattccaaccagttcgtcgcctatcag
gcaatgaacaaggataagttggcgctcaccaattacatgcgagtcaagccggattcgaag
ggcggccactatcgcaagccttcgatgttcttctcggtctcggcccagtcgaaagcaatc
gacctagccgtcgactacgtcaatttcttcgtcaagaatccagaggcagtgctgctcctg
gatgtcgaacgcggcattccggaatcggcggccatgcgcgaggtcgtcgcgacgaagctc
gatgaaaacggcaaggtggcactggcctatgtcagcggtctcggcgatctcgccggcaaa
ttgcctccgccgcccccggctggtgccggtgaaggcgagctgatgctgcgaaacattgcc
gaacaggtcggtttcggacagctgtctcccgccgatggcggcaaacagcttgtcactgaa
attacgcagattctcgcaagaggctga
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