Rhizobium etli CFN 42: RHE_CH00095
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Entry
RHE_CH00095 CDS
T00317
Symbol
rnd1
Name
(GenBank) RNAse D protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ret03016
]
RHE_CH00095 (rnd1)
Enzymes [BR:
ret01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RHE_CH00095 (rnd1)
Transfer RNA biogenesis [BR:
ret03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RHE_CH00095 (rnd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABC88921
UniProt:
Q2KE15
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All DBs
Position
105297..105923
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AA seq
208 aa
AA seq
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MAATIRYHEGDISAADAARYTGAIAIDTETLGLVPRRDRLCVVQLSPGDGTADIIRIAAG
QKAAPNLVALLEDPTHQKIFHYGRFDIAVLFHTFGVTTNPVFCTKIASRLCRTYTDRHGL
KDNLKEMLDVDVSKAQQSSDWAAETLSPAQLEYAASDVLYLHALRDKLTARLIRDGRFDH
ATACFAFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccatccgttatcacgaaggcgatatttccgcggccgacgcggcccgctac
accggcgcgatcgcgatcgataccgagacgctgggcctggtgccgcggcgggatcgtctc
tgcgtcgtccagctttctccgggtgacggcaccgccgacatcatccgcatcgccgccggc
cagaaagcggcccccaatctcgtcgcccttctcgaagatcccacgcaccagaagatcttt
cattacggccgcttcgatattgccgtgctctttcataccttcggcgtcacgaccaatccg
gtgttctgcaccaagattgcttcgcgcctctgccgcacctacaccgatcgccacggcctc
aaagacaatctcaaggagatgcttgacgtcgatgtctccaaggcgcagcaatcttccgat
tgggcggctgagacgctgtcgccggcccagctcgaatatgccgcttccgacgtgctttat
ctgcacgcgcttcgagataagctgacggcccgcctgatccgcgacggccggttcgaccac
gccacggcctgcttcgcattcctgccgacccgcgccaagctcgaccttctcggctgggaa
gaggccgatatcttcgctcacagctga
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