Rhizobium etli CFN 42: RHE_CH00171
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Entry
RHE_CH00171 CDS
T00317
Name
(GenBank) probable multidrug ABC transporter, ATP binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_CH00171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH00171
Enzymes [BR:
ret01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
RHE_CH00171
Transporters [BR:
ret02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RHE_CH00171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_29
AAA_22
ABC_ATPase
AAA_30
AAA_21
Mg_chelatase
AAA_23
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ABC88996
RhizoBase:
RHE_CH00171
UniProt:
Q2KDU0
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All DBs
Position
complement(184702..186489)
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AA seq
595 aa
AA seq
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MEAVESRKQSVSSDTVTGILKRIVAENGRDHLWGYVFAITCLVVVALSTAFTAWIMRAII
DEAFANRRADVVWIICLSIFVAFVLRGFASYGQAVALSKVGNNIVARYQRRLYAHLMTLS
VGFFSEARSAHIAAQVSQNVSGIRDVLNLTITSTVRDLLTFVSLIGVMVLQDPLLSLAVF
VMAPPLLYALRYVSKRLRSATREAVHLNSHVLGAMQETIQGIAIVKAFTMEEELENKVNK
LITAAENRANRIARLSERTSPLTESFAGFAVASVLAYAAYRSIYYNVAPGAFFSFVTALL
LAYDPARRLARLQVQMERAVVNARMIYELLDMEPRQRDLPDARPLVVTQARIEFRNVSFA
YGNESVLNSVSFVAEGGGTTALVGPSGAGKSTVISLIPRFYDPREGEILIDGQDIAHITK
KSLRQQLAYVSQQPYLFEGTIRDNIRYGRPEATDAEVEEAARLAYAHDFITAQPQGYDTP
VGENGVTLSGGQRQRLSIARALVRNAPILLLDEATSALDTESEAAVQKALDEAMTGRTVV
VIAHRLSTVVRADKIVVMQQGRVVEEGNHETLAKVSDGLYARLNNLQRPSASDSY
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
ttggaagccgtggaaagcagaaagcagagcgtcagcagcgataccgtaaccggcatcctg
aagcgcatcgtcgctgaaaacggccgcgaccatctctggggttatgtcttcgcgatcacc
tgcctcgtggtcgtggcgctttcgacggcattcaccgcctggatcatgcgggcgatcatc
gacgaggccttcgccaaccgccgcgccgacgtcgtctggatcatctgtctttcgatcttc
gtcgccttcgtgctgcgtggctttgccagctacggccaggccgtggcgctttccaaggtc
ggcaacaatatcgtcgcccgatatcagcgccgcctctatgcgcatctgatgacgctttct
gtcggctttttcagcgaggcacgctcggctcacatcgcggcgcaggtgagccagaacgtc
agcggcatccgtgacgtgctcaacctgacgatcacctcgacggtgcgcgacctcctgacc
ttcgtttcgctgatcggcgtgatggtcctccaggacccgctgctcagcctcgccgtgttc
gtcatggcgccgccgctgctctatgcgctgcgttatgtttccaaacgccttcgctcagca
acccgcgaggccgtgcatctgaacagccacgtgctgggagccatgcaggagacgatccag
ggtattgccatcgtcaaagccttcacgatggaagaggagctggagaacaaggtcaacaag
ctcatcacggccgccgaaaaccgcgcgaaccggattgcccggctctccgagcgcacctcg
ccgctgacggagagcttcgcaggctttgccgtcgccagcgtgcttgcctatgccgcctat
cgctcgatctattacaatgtggccccgggcgccttcttctccttcgtaacggcgctgctg
cttgcctatgacccggcccgccgccttgcccgccttcaggtgcagatggaacgcgccgtc
gtcaacgcgcggatgatttacgaactgctcgacatggagccgcgccagcgcgacctgccg
gatgcccggccgcttgttgtgacgcaggcgcgcatcgaattccgcaatgtttccttcgcc
tacggcaatgaaagcgtgctgaacagcgtcagcttcgtcgccgagggcgggggaaccacg
gcgctcgtcggcccctcgggtgcgggcaaatccaccgtcatcagcctcattccgcgcttc
tacgatccgcgcgaaggcgagatcctgatcgacgggcaggatatcgcccatatcaccaag
aagtcgctgcgccagcagctcgcctatgtctcgcagcagccctacctgttcgagggcacg
atccgcgacaatatccgctacggccggcccgaagcgaccgatgcagaggtggaagaggct
gcccggcttgcctatgcgcatgatttcatcacggcgcagccgcagggttatgatacgcct
gtcggcgaaaacggcgtgacgctttcgggcggccagcgccagcggctgtcgatcgcccgt
gcattggtgcgcaacgcgccgatcctgctgctcgacgaagcaacttccgcgctcgacacc
gaatccgaggccgccgtgcagaaggcgctcgacgaggcgatgaccgggcgcaccgtcgtt
gtcattgcccaccgtctttcgaccgttgtgcgcgccgacaagatcgtcgtcatgcagcag
ggccgggtcgtcgaggaaggcaatcatgagacgcttgcgaaggtcagcgacggtctttac
gctcgcctcaacaacctgcagaggccttcggcctcggattcatactaa
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