Rhizobium etli CFN 42: RHE_CH00178
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Entry
RHE_CH00178 CDS
T00317
Name
(GenBank) probable peptide ABC transporter, ATP binding protein
KO
K13896
microcin C transport system ATP-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_CH00178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH00178
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
RHE_CH00178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_22
AAA_29
AAA_16
AAA_25
SbcC_Walker_B
nSTAND3
Mg_chelatase
SLFN-g3_helicase
ATP-synt_ab
RsgA_GTPase
DO-GTPase2
CbiA
FtsK_SpoIIIE
AAA_13
MobB
AIG1
Motif
Other DBs
NCBI-ProteinID:
ABC89003
RhizoBase:
RHE_CH00178
UniProt:
Q2KDT3
LinkDB
All DBs
Position
193663..195291
Genome browser
AA seq
542 aa
AA seq
DB search
MTEPLLSVRDLSVAFHQGGETSLAVDRISFDIAKGEVVALVGESGSGKSVSANSILRLLP
YPSASHPSGEILFKGKDLLKASERALREVRGNDITMIFQEPMTSLNPLHTIEKQIAEILA
LHQGLTGQSARMRVLELLNQVGIREPEKRLKAYPHELSGGQRQRVMIAMALANRPELLIA
DEPTTALDVTVQAQILELLRQLKTAHGMSLLFITHDLGIVRKFADRVCVMTKGRIVETGT
VEEVFANPKHDYTRHLLASEPRGEPPLADPSKPVVMEGSDIRVWFPIKAGLMRRVVDHVK
AVDGIDLSLRAGQTLGVVGESGSGKTTLGLALTRLISSQGRIAFFGKDIAGYSFSEMRPL
RNQLQIVFQDPYGSLSPRMSVGDIIAEGLKVHERALSAEERDQRVCWALEEVGLDPLTRW
RYPHEFSGGQRQRIAIARAMVLKPRFVMLDEPTSALDMSVQAQVVDLLRDLQKKHDLAYL
FISHDLKVVKALANDVIVMRFGKVVEQGPSAEIFRAPKDDYTKALMAAAFNIEAVPTPAV
QQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccgctcctttccgtccgcgatctctcggttgcctttcatcagggcggcgaa
acctcgcttgccgtcgatcggatctcgttcgatatcgccaaaggcgaggtcgtagcgctc
gtcggcgaatccggctccggcaaatcggtctcggccaactcgatcctgcgccttctgcct
tatccctcggcaagccacccctccggggaaatcctgttcaagggcaaggacctcttgaag
gcatcggagcgggcgctgcgcgaggtgcgcggcaatgacatcaccatgatcttccaggag
ccgatgacctcgctcaatccgcttcatacgatcgaaaagcagatcgccgagatcctcgcc
ctgcaccaggggctcaccggccagtcggcgcggatgcgcgtgctggaactgttgaaccag
gtcggcatccgcgagcctgagaagcggttgaaggcctatccgcacgaactctccggcggt
cagcgccagcgcgtcatgatcgccatggcgctcgccaaccggccggaactgctgatcgcc
gacgaaccgacaacagcgctcgacgtcaccgtacaggcgcagattctagagcttctccgg
cagttgaagacggcgcacggcatgtcgctgctgttcatcacccacgatctcggcatcgtg
cgcaaattcgccgaccgcgtctgcgtcatgaccaagggccggatcgtcgaaaccgggacg
gtcgaggaggtcttcgccaatccgaagcacgactatacccgccatcttctcgcttccgaa
ccgcgcggcgagccgccgcttgccgatccgtcgaagccggtggtgatggaaggctcggat
atccgcgtctggttcccgatcaaggcggggttgatgcgccgcgtcgtcgatcatgtgaag
gcggtcgacggcatcgatctttcgctgcgcgccggacagacgctcggagtcgtcggcgaa
tccggttcgggcaagaccacgctcgggcttgccctcacccgtctgatctcgtcgcaggga
cggattgcctttttcggcaaagatatagccggttattctttcagcgaaatgcggccgtta
cgcaaccagctgcagatcgtcttccaggacccctacggttcgctcagcccgcgcatgtcg
gtcggcgatatcattgccgaagggctgaaggtgcatgagcgcgccttgagcgccgaggag
cgcgaccagcgtgtctgctgggcgctggaggaggtaggcctcgatccgctgacccgctgg
cgctatccgcatgaattttcaggcggccagcgccagcgcatcgccatagctcgcgccatg
gtgctgaagccccgtttcgtcatgctcgacgagccgacatccgcgctcgacatgagcgtg
caggcccaggtcgtcgacctcctgcgcgatctgcaaaagaaacacgacctcgcctatctc
ttcatcagccacgacctgaaggttgtgaaggcgctcgccaacgacgtcatcgtcatgcgg
ttcggcaaggtggtggagcaaggtccctccgcggaaatcttccgcgcgcccaaggacgat
tacaccaaggcgctgatggcagccgcgttcaacatcgaggcggtgccgacgcccgccgtg
cagcagtaa
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