Rhizobium etli CFN 42: RHE_CH00188
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Entry
RHE_CH00188 CDS
T00317
Name
(GenBank) probable sugar ABC transporter, ATP-binding protein
KO
K23537
general nucleoside transport system ATP-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_CH00188
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH00188
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
RHE_CH00188
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
SMC_N
AAA_23
ATP-synt_ab
AAA_15
AAA_27
Allene_ox_cyc
RsgA_GTPase
AAA_30
AAA_22
XRN1_D2_D3
Glycolipid_bind
Motif
Other DBs
NCBI-ProteinID:
ABC89012
UniProt:
Q2KDS4
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All DBs
Position
202176..203687
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AA seq
503 aa
AA seq
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MTDKPAIELVGIDKKFGAVHANKDINLTVAKGTIHGIIGENGAGKSTLMSIIYGFYHADS
GEIRVNGNPVSIRDSQAAIAAGIGMVHQHFMLVDNFTVLENVMLGAEGGSLLARGVASAR
AELKRLETEYGLEVDPDALIEELPVGLQQRVEILKAMYRGAEILILDEPTGVLTPAEADH
LFRILKVLRDQGKTIILITHKLREIMAITDMVSVMRRGEMVATRKTAETTVEELAELMVG
RRVLLRVQKGEANPGAAVLSVRNLTVKDNRGVTMVDNVSFDVRAGEIVGIAGVAGNGQSE
LLEAIAGIRKPVSGEILLDGQTIDKADPARLRDLGLAHIPEDRHHMGLVLKFEEYENSVL
GYHRRPGYSKGPLLDLEAIRKDAMEKIEKYDIRPPNPRLKTANFSGGNQQKIVVAREIER
DPKMLIIGQPTRGVDIGAIEFIHRRIIEMRDAGKAILLVSVELDEIRALSDRILVMFAGH
VVGEKTPDAGEQTLGLMMAGIAA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgacagataagcccgctatcgagcttgtcggcatcgataagaaattcggtgccgtccac
gccaacaaggacatcaatcttaccgttgccaaggggacgatccacggcatcatcggtgaa
aacggcgccggcaaatcgacgctgatgtcgatcatctatggtttctaccacgccgacagc
ggcgagatccgcgtcaacggcaatccggtcagcatccgcgacagccaggcggcgatcgcc
gccggtatcggcatggtgcaccagcatttcatgctggtcgacaatttcaccgtgctcgag
aatgtcatgctcggcgccgaaggcggctcgctactggcgagaggcgttgcatcggcccgc
gccgagctcaagcggctggaaaccgaatacggccttgaggtcgatccggacgcactgatc
gaagagctcccggtcggcctgcagcaacgcgtcgaaattctgaaagccatgtatcgcggc
gccgagatcctgattctcgatgaacccacaggcgtgctgacgccggcagaagccgaccac
ctcttccgcatcctcaaggtgctgcgcgaccagggcaagacgatcatcctcatcacccac
aagctgcgcgagatcatggcgatcaccgatatggtctccgtcatgcgccgcggcgagatg
gtcgccacccgtaagacggcggaaacgacggtggaggagcttgccgaactgatggtcggc
cgccgcgtgctgttgcgcgtgcagaagggcgaagccaatccaggtgctgccgtgctttcc
gtccgcaacctcacagtcaaggataatcgcggcgtcaccatggtcgacaatgtctccttc
gacgtgcgcgccggcgagatcgtcggcatagccggggttgccggcaacggccagtcggaa
ttgctggaggcgattgcgggaatccgcaagcccgtctccggcgaaattcttctcgacggc
cagacgatcgacaaggccgatcccgcccgcctgcgggacctcgggcttgcccatattccc
gaggaccggcaccacatggggctggtgctgaaattcgaggaatatgaaaactccgtgctc
ggctatcaccgccgcccgggctatagcaagggcccgctgctcgatctcgaggcgatccgc
aaggatgcaatggaaaagatcgaaaaatacgacatccgcccgccgaacccgcggctgaag
acggcgaacttttccggcggcaatcagcagaagatcgtcgttgcccgcgagatcgagcgc
gatccgaagatgctgatcattggccagccgacgcgcggcgtcgatatcggcgccatcgaa
ttcattcaccgccggatcatcgagatgcgcgatgcgggcaaggcgatcctgctcgtctcc
gtcgaactcgatgaaatccgcgccctttcagaccgtatccttgtcatgttcgccggccat
gtcgtcggcgagaagacgcccgatgccggtgaacagaccctcggcctgatgatggccggc
attgccgcgtga
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