Rhizobium etli CFN 42: RHE_CH00221
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Entry
RHE_CH00221 CDS
T00317
Name
(GenBank) probable dipeptide ABC transporter, substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_CH00221
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH00221
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHE_CH00221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABC89045
RhizoBase:
RHE_CH00221
UniProt:
Q2KDP1
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All DBs
Position
complement(233113..234642)
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AA seq
509 aa
AA seq
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MNKVSFASSARFISRLSLGAALSAGLMMTAMTPAEAAKTTLNLGMSVEPTGLDPTIAAPV
AIGQVTWQNVFEGLVTIDQTGKVQPQLAKSWEISADGLTYTFKLRTGVKFHDGEAFDAAA
AKFALDRARGANSVNPQKRFFASIASIETPDAETLVLHLSAPTGSLIYWLGWPASIMVAP
KSAENDKVTPIGTGPFKFASWMKGDRVELVRNGDYWNKEASAKLDKVTFRFIADPQAQAA
ALKSGDLDAFPEFAAPELMSSFDGETRLITKVGNTELKVVAGMNNAKKPFDDKRVRQALM
MAIDRQTVIDGAWSGLGTPIGSHYTPNDPGYKDMTGVLPYDVEKAKALLAEAGYPNGFTF
TIKSPQMAYAPRSAQVMQAMFAEIGVTMNIEPTEFPAKWVQDVMKDRNFDMTIVAHAEPL
DIDIYARDPYYFNYRNPAFDALMKKVQETADPAAQNAVYREAQEILAEDVPALYLFVMPK
LGVWDRKLKGLWENEPIPSNVLSGVYWEE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggtttcgtttgcgtcttcggcgcgcttcatcagccggctttccctcggtgct
gcgctgtcggccggtctcatgatgacggcaatgacaccggcggaagcggccaagaccacc
ctcaatctcggcatgagcgtcgaaccaacaggcctcgatccgacgatcgccgcaccggtc
gcgatcggccaggtcacctggcagaatgtgtttgaggggctggtgacgatcgatcagacc
ggcaaggtccagccgcagctggcgaaaagctgggaaatctcggccgatggcctgacctat
accttcaagctgcggaccggcgtcaaattccatgacggcgaagcgttcgatgccgccgcc
gccaaatttgcgctcgaccgcgcccgcggcgcgaattcggtcaatccgcaaaagcgcttc
ttcgcctcgatcgcctcgatcgagacgccggatgccgaaacgctggtgctgcatctctcg
gcgccgaccggcagcctgatctactggctcggctggccagcatctatcatggtcgccccg
aagtcggccgagaacgataaggtcactccgatcggcaccggtcccttcaagttcgccagc
tggatgaagggcgacagggtcgaactcgtcagaaatggcgactactggaacaaggaggcg
tctgccaagctcgacaaggtgaccttccgcttcatcgccgacccgcaggcgcaggcggcc
gcgctgaaatccggcgatctcgatgcctttccggaatttgccgcgcccgagctgatgagc
tccttcgacggcgaaaccaggctcatcaccaaggtcggcaataccgaacttaaggtcgtc
gccggcatgaacaatgcgaagaagcctttcgacgacaagcgcgtccgccaggcgttgatg
atggcgatcgaccggcagacggtgatcgacggagcatggtccggcctcggcacgccgatc
ggcagccactacacgccgaacgatccgggctacaaggacatgactggggtgctgccctat
gatgtcgaaaaggcgaaggcgctgctggccgaggctggctatcccaacggcttcaccttc
acgatcaaatcaccgcagatggcctacgccccgcgcagcgcccaggtgatgcaggcgatg
tttgccgaaatcggtgtgacgatgaatatcgagccgacggaatttccggcgaaatgggtg
caggacgtcatgaaggatcgcaacttcgacatgacgatcgtcgcccatgccgaaccgctc
gacatcgacatctacgcacgcgatccctattatttcaactacaggaatccggccttcgat
gcgctgatgaagaaggttcaggagaccgccgatcccgccgcacaaaatgcggtttaccgc
gaagcacaagagatcctcgccgaggacgtaccggcgctctacctcttcgtcatgccgaaa
ctcggtgtctgggacagaaagctgaaggggttgtgggagaacgaaccgattccgtcgaat
gtgctctcgggggtctattgggaggagtga
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