Rhizobium etli CFN 42: RHE_CH00335
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Entry
RHE_CH00335 CDS
T00317
Name
(GenBank) putative protein transport protein
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_CH00335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH00335
02044 Secretion system [BR:
ret02044
]
RHE_CH00335
Transporters [BR:
ret02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
RHE_CH00335
Secretion system [BR:
ret02044
]
Type I secretion system
Multiple protein transporter
RHE_CH00335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_25
AAA
AAA_16
NACHT
RsgA_GTPase
AAA_30
Zeta_toxin
AAA_22
nSTAND3
AAA_29
TsaE
Motif
Other DBs
NCBI-ProteinID:
ABC89157
UniProt:
Q2KDC9
LinkDB
All DBs
Position
complement(340959..342704)
Genome browser
AA seq
581 aa
AA seq
DB search
MKTKQPPPALQVVMKEARRAIRPLIWFSGGINVLMLTGALYMLQVYHRVLSSHSLETLAM
LSLMAAAALAAMAGLEVVRGRLLATVGSWMNARLAPVLLTASVEYAAAKPGQANARPLRD
LDQVRNFFTSPSIFPILDAPWAPLFFAAIFFMHPWLGWLALSGGGVLFALALLNEWLTRK
PLTEATSAQSRAYNQAEAAIRNAEVVQAMGMLKPLLEGWKVQQDEANRGQVLAANRGGII
SAIARCHRLALQMGILGLGAYLVLRNEASPGIMVSASILMGRALSPVEQAIGTWKATVGA
RAAYRRLTAVAGEHPEATPVPAMPRPTGRFEADNVVLARQGGEHILKGINFRLEPGESMA
LIGQSGAGKTSLARILAGAWRPSGGRALLDGMDVAQWAAEDRGHHVGYLPQDIELFAGNV
CENICRFATVSPVVFDKAVKAAQLAGVHELIKGLPKGYLTEIGESGAVLSGGQRQRIGLA
RALYGDPALIILDEPNSNLDREGEEALIAALGTVKAAGTTVILIAHRPNIMETVDKILVL
NRGQQDLFGPRDHVFNELAARVRKVAQMPTIVAKQQGPKQP
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaacagccgcccccggcgcttcaggttgtaatgaaagaagccagacgggcc
atccggccgcttatctggttcagcgggggcatcaacgtgctgatgctgaccggggcgctt
tacatgctgcaggtctatcaccgcgtgctgtccagccacagtctcgagaccttggcgatg
ttgtcgctgatggcggcagccgcacttgcggcaatggcggggctggaggtggtgcgcggg
cgccttctggcaaccgtgggatcgtggatgaacgcgcggctggcgcccgttctgctgacg
gcatcggtggaatatgccgccgcaaaacccggccaggccaacgcccgcccgctgcgcgac
ctcgaccaggtccggaatttcttcaccagcccgagcatcttccccattctcgatgcgcct
tgggcgccgctgtttttcgccgccatcttcttcatgcatccctggctgggttggctggcg
ctgtcgggcggcggggtgctgtttgcactggccttgctcaacgaatggctgacgcgcaag
ccgttgaccgaggccaccagcgcacagtcgcgggcctacaaccaggccgaggcggcaatc
cgcaacgccgaggtcgtccaggcgatgggcatgctgaagccgctgctggaaggctggaag
gtgcagcaggacgaggcaaacaggggccaggttctcgccgccaaccgcggcggcatcatc
tcggccattgcgcgttgccaccggctggctctgcaaatgggaatattgggactcggagcc
tatctcgtcctgcgcaacgaggcttccccgggcatcatggtctccgcctccatcctgatg
ggccgcgcgctatcgccggtcgagcaggcgatcggcacgtggaaggcgacggtcggcgcg
cgcgccgcctaccggcgcctcaccgccgtcgccggcgagcacccagaggccacgccggtt
ccggcaatgccgcggccgacaggccggttcgaggccgacaatgtcgtgcttgcccgacag
ggcggcgaacatattctcaaagggatcaacttccgtctcgagccgggtgaatccatggct
ttgatcggccagagcggggccggcaagacgagcctggcacgcatcctggccggcgcctgg
cgaccttccggcgggcgggctttgctcgatggcatggatgtcgcccaatgggcggcggag
gaccgcggtcatcatgtcggctaccttccgcaggacatcgagcttttcgcaggcaacgtc
tgcgaaaatatctgccgcttcgccacggtcagtcccgtggtcttcgacaaggcggtcaag
gcagcgcagctggcaggcgtccacgaactgatcaaagggctgccgaagggttacttgacc
gagatcggtgaatccggcgcggtgctgtcgggcggacagcgccagcgcatcggcctggca
cgggcgctctacggcgatccggcgctcatcatcctggacgagcccaattcgaatctcgac
cgggagggcgaggaggccttgatcgcggcgctcggcacggtcaaggcggcgggcacgacc
gtcatcctgatcgcacaccggccgaacatcatggaaaccgtcgacaagatactggttctc
aaccgaggccagcaggacctgttcggtccgcgcgaccatgtcttcaatgaactcgccgca
cgtgtccgcaaggtcgcgcagatgccgacgatcgtggcgaagcagcaaggaccgaaacag
ccatga
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integrated database retrieval system
