KEGG   Rhizobium etli CFN 42: RHE_CH00549
Entry
RHE_CH00549       CDS       T00317                                 
Symbol
lhr
Name
(GenBank) ATP-dependent RNA/DNA helicase protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ret  Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:ret00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ret03400]
    RHE_CH00549 (lhr)
Enzymes [BR:ret01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RHE_CH00549 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     RHE_CH00549 (lhr)
DNA repair and recombination proteins [BR:ret03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RHE_CH00549 (lhr)
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4
Other DBs
NCBI-ProteinID: ABC89367
UniProt: Q2KCR9
LinkDB
Position
564467..566977
AA seq 836 aa
MDQIDSEASTLLPAAFTRWFAEKGWRPRAHQLELLARAESGESTLLIAPTGAGKTLAGFL
PSLTDLTRRGRIPPGSAFTGIHTLYVSPLKALAIDIERNLMKPVVEMGLPVTVENRTGDT
PNAKRQRQKLNPPDILLTTPEQVALLLANREAERFFKDLKYVVLDELHSLVTSKRGHMLS
LGLARLRRVAPNLKTIGLSATVAEPMDLQRWLVPQQEGREHHAGLVVVEGGAKPDISILS
TEERIPWAGHSAKYAIPDVYKQLLDHQTTLLFVNTRSQAEMLFQELWTINDDNLPIALHH
GSLDVAQRRKVEAAMAENRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRA
NHRMDEPSKAILVPANRFEVMECQAALDANYIGAQDTPPVGRGALDVLAQHVLGMACAEP
FDMLELYDEVTSASPYADLSWETFERVVDFVATGGYALRTYERYARIRKTKEGRWRVSNP
AVAQQYRLNLGTIVESPMLNIRMVKRGEGGRIGRGGATLGKVEEYFLEQLSPGDTFIFSG
KVLRFEGIRENECLASQAFSLDPKIPAYNGGKFPLSTYLAEQVRAMIADPDRWRHLPDQV
RDWLSLQTDKSMLPKRDEFLIETFPRGSRFYMVAYPFEGRLAHQTLGMLLTRRLDRAGAK
PLGFVATDYSLAIWGLEDMGLMIGNGRLSLSDLFDADMLGDDLEAWLNESFLLKRTFRNC
AVIAGLIERRHPGKEKSGRQITVSADLIYDVLRSHEPDHILLQATRQDAATGLLDISRLG
DMLMRIRGHITHRPLDHISPLAVPVMLEIGREAVPGEAHDALLAEAADDLIAEALA
NT seq 2511 nt   +upstreamnt  +downstreamnt
gtggaccagatcgactccgaagccagcaccctgctgcctgccgcctttacccgctggttt
gcggaaaagggctggcgcccgcgcgcccatcagctggaactgcttgcccgcgccgagagt
ggcgaaagcacgctgctgattgcgccgaccggcgccggcaagacgcttgccggttttctg
ccgtcgctgaccgatctcacccgccgcggcagaatcccgcccggttccgccttcaccggc
attcacacgctctatgtctcgccgttgaaggcgctggcgatcgatatcgagcgtaacctg
atgaagcctgttgtggagatgggcctgccggtcaccgtcgaaaaccgcaccggcgatacg
ccgaacgccaaacgccagcgccaaaaactcaatccgccggatattctactgacgacgccc
gagcaggtcgccctgcttctcgccaaccgcgaggccgagcgtttcttcaaggatctgaaa
tatgtcgtgctcgacgagctgcattcgctcgttacctccaagcgcggccatatgctgtcg
ctcggccttgcccgcttgcgccgcgttgccccaaacctcaagaccatcggcctgtcggcg
acggtcgccgagccgatggatctgcagagatggctggtcccccagcaggagggcagggag
catcacgccggcctcgtcgtcgtcgaaggcggcgccaaacctgacatttcgatactgtcg
accgaagagcgcattccctgggccggccattccgccaaatatgccattcccgacgtctac
aaacagctgctcgaccaccagacgacgctgctcttcgtcaatacccgcagccaggccgaa
atgctgttccaggagctctggacgatcaatgacgacaatctgccgattgccctccaccac
ggctcgctcgatgtcgcccagcgccgcaaggtcgaggcggcgatggccgaaaacaggctg
cgtgccgtcgtcgccacctcgacgctcgatctcggcatcgactggggcgatgtcgatctg
gtcatccatgtcggggcgccgaagggcgcatcccgtcttgctcagcgcatcggccgcgcc
aatcaccgaatggacgagccgtcgaaggcgatcctcgtgccggccaaccgcttcgaggtg
atggagtgccaggcagcgctcgacgccaattatatcggcgcacaggacacgccgcccgtc
ggccgcggcgcgctcgacgtgctcgcccagcacgtgctcggcatggcctgcgccgaaccc
ttcgacatgctggaactctatgacgaagtcaccagtgcctcaccttatgccgatctcagc
tgggagactttcgagcgcgtcgtcgatttcgtcgcgaccggcggttatgcgctcaggacc
tacgaacgttacgcccgcatccgcaagaccaaggaaggccgctggcgcgtctccaatcct
gctgtcgcccagcaatatcgcctcaacctcggcaccatcgtcgaaagcccgatgctgaac
atccgcatggtcaagcgcggcgagggcggccggattggccgcggcggcgcgacgctgggt
aaggtcgaggaatatttcctcgagcaattgtcgccaggcgacaccttcatcttctccggc
aaggtgctgcgtttcgagggcatccgcgaaaacgaatgcctggcgtcgcaggccttttcg
ctcgatccgaagatccccgcctataatggcggcaagtttccgctgtcgacctatctcgcc
gagcaggtgcgggcgatgatcgccgatcccgaccgctggcgccatttgccggatcaggtg
cgcgactggctgtcgctgcagacggacaagtcgatgctgccgaagcgtgacgagttcctg
atcgaaaccttcccgcgcggcagccgcttctatatggtcgcctatcccttcgagggccgt
ctcgcccatcagacgctcggcatgctgctcacccgccggctggaccgggcgggcgccaag
ccgctcggcttcgtcgccaccgattactctctcgccatctgggggctggaagatatgggc
ctaatgatcggcaacggccggctcagcctttccgacctgttcgacgcggacatgctgggc
gacgatctcgaagcctggctcaacgaatccttcctgctgaagcgcaccttccgcaattgc
gccgtgattgcaggcttgatcgagcgccgccatcccggcaaggaaaagagcggccgtcag
atcaccgtctccgccgatctgatctatgacgtgctccgcagccatgagccggatcacatc
ctcttgcaggcgacgcggcaggatgcggcgaccggacttttggatataagccgacttggc
gatatgctgatgcgaatcaggggccacatcacccatcgcccgctcgatcatatttccccg
ctcgccgtgccggtgatgctggagatcggacgggaggcggtgcccggcgaggcccacgat
gcgctattggccgaggcggcggacgatctgatcgccgaagctctggcataa

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