Rhizobium etli CFN 42: RHE_CH00608
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Entry
RHE_CH00608 CDS
T00317
Symbol
appB
Name
(GenBank) oligopeptide ABC transporter, permease protein
KO
K02033
peptide/nickel transport system permease protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHE_CH00608 (appB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH00608 (appB)
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHE_CH00608 (appB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
ABC89424
RhizoBase:
RHE_CH00608
UniProt:
Q2KCL2
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All DBs
Position
complement(624735..625694)
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AA seq
319 aa
AA seq
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MLQYSLRRLLIGAGMLFALSMLIFVMLRLTPGDPIDAYIDPNVPMSASDLAELRVTLGLD
QPLPVQYVAWLRQALLGNLGYSIKRPDQPVLGLVLSRVGPTVLLMGSAIAIAIIAGIATG
IVSAVRRNSIADLSLSVLAVTGISSPPFLSALVGLYLFSVYFNWMPSGGMLTPGQEFSVA
DLLHHLILPATLLAVAQTALIMRYMRASMLEVLNQDYVRTARAKGVFEFWVITKHALRNA
LLPVITLIGSTIGLAIGGAIFIESVFNWPGMGLLMVDAVEGRDYPVIMGSTLVIGACVVV
VNLLTDLAYAVVDPRIKVG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaatacagtctccggcggctgctgatcggagcgggcatgctctttgccttgagc
atgctgatcttcgtcatgctgcgccttacccccggcgatccgatcgacgcctatatcgac
ccgaacgtgccgatgtcagcgtcggatcttgcggaactgcgggtcacgctcggcctcgac
cagccgctgccggtgcaatatgtcgcctggctgcggcaggcgctgttgggaaatctcggc
tattcgatcaagcggcccgaccagccggtgctcggcctcgtgctgtcgcgggtcggcccg
acggttctgctgatgggatcggcgatcgcgatcgcgatcatcgccggcatcgcgaccggc
atcgtcagcgcggttcgccgcaattcgatcgccgacctgtccttgtcggtcttggcggtc
accggcatctccagcccgcccttcttaagcgcgctggtcggtctctatctgttttcggtc
tatttcaactggatgccctccggcggcatgctgacgccgggccaggaattctccgtcgcc
gaccttctccatcacctgatcctgcccgcgacattgctggccgtcgcgcagacagcgctg
atcatgcgctatatgcgcgcgtccatgctggaggtgctgaaccaggattatgtgcgcacg
gcgcgcgccaagggcgtcttcgaattctgggtcatcaccaagcacgccctgcgcaatgcg
ctgcttcccgtcattacgctgatcggctcgaccatcggccttgcgatcggcggggcgatc
ttcatcgaaagcgtcttcaactggcccggcatgggcctgctcatggtcgatgccgtggag
ggccgcgactatcctgtcatcatgggttcgacgctggtgatcggcgcctgcgtcgtcgtg
gtcaatcttctgaccgaccttgcctatgcggtggtcgatccgcggatcaaggtgggctga
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