Rhizobium etli CFN 42: RHE_CH01181
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Entry
RHE_CH01181 CDS
T00317
Name
(GenBank) putative ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ret03400
]
RHE_CH01181
DNA repair and recombination proteins [BR:
ret03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
RHE_CH01181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
AAA_16
ResIII
AAA_30
T2SSE
AAA_10
Hydrolase
TrwB_AAD_bind
AAA_7
HTH_41
AAA_19
nSTAND3
Hydrolase_6
CbiA
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ABC89986
UniProt:
Q2KB00
LinkDB
All DBs
Position
complement(1233612..1235168)
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AA seq
518 aa
AA seq
DB search
MIEDGKIFIGASRNPDDSINKPEYLDLKFGNRHGLVTGATGTGKTVTLQVLAEGFSRAGV
PVFAADIKGDLSGIAAKGEPKDFLIKRAEQIGFTDYEFDQFPVIFWDLFGQKGHRVRTTV
AEMGPLLLARLMDASEPQEGVINIAFKIADQAGLPLLDLKDFTSLLNYMGENATELSSQF
GLISKASVGSIQRALLVLEQQGAEHFFGEPALKISDIMRTHTNGYGQISVLAADKLMMNP
RLYATFLLWLLSELFEELPEVGDPEKPKLVFFFDEAHLLFNDAPKVLIERVEQVVRLIRS
KGVGVYFVTQNPLDVPETVLAQLGNRAQHALRAYSPREQKAVKTAADTFRPNPAFDCATV
ITNLGTGEALVSTLEAKGAPSIVERTLIRPPSGRVGPLTDGERQQVMDRSPVLGIYDEDV
DRESAFEMLAARAKKAAEAEAAKRAQEDAAEQPGTTSGWTLPGFGGDDDNRQGRGTSRGR
SGYQRETVVEAAMKSVARTVATQVGRALVRGILGSLKR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacggcaagattttcatcggcgcgagccgcaatcccgacgacagcatcaac
aagccggaatatctggatctgaagttcggcaaccgccacggcctcgtcaccggcgccacc
ggcaccggcaagacggtgacgctgcaggtgctggcggaaggcttttcccgggccggcgtt
ccggtctttgccgccgacatcaagggcgatctttccggcatcgccgccaagggggagccc
aaggattttctcatcaagcgcgccgagcagatcggcttcaccgactatgaattcgaccag
tttccggtgattttctgggatctgttcgggcaaaagggccatcgcgtgcgtaccaccgtt
gccgagatggggccgctgctgctcgcccggctgatggatgccagcgagccccaggaaggc
gtcatcaacatcgccttcaagatcgccgaccaggccggactgccgctgctcgatctcaag
gatttcacctcgctactcaactatatgggcgagaatgccaccgagctttccagccagttc
ggtctgatctccaaggcctcggtcggctcgatccagcgggcgctgctcgtgctcgaacag
caaggcgccgagcacttcttcggtgaaccggcgctgaagatttccgacatcatgcgcact
cacaccaatggttacggccagatctcggtgcttgccgccgacaagctgatgatgaacccg
cgcctttacgccaccttcctgctgtggctgctgtcggagctgttcgaggaactgccggaa
gtgggcgatccggaaaagccgaagctcgtcttcttcttcgacgaagcacatctgctcttc
aacgacgcgccgaaggttctgatcgaacgcgtcgagcaggtggtgcggctgatccgttcc
aagggcgtcggcgtctatttcgtcacgcagaacccgctcgacgttccggaaacggtgctc
gcccaactcggcaaccgcgctcagcatgcgctgcgcgcctattcgccgcgcgaacagaaa
gcggtgaagacggcggccgatacgttccgcccgaacccggccttcgactgcgccaccgtc
atcaccaatctcggcaccggcgaggcgctggtctcgacgctggaggctaagggcgcgccg
tcgatcgtcgagcgtacgctgatccgcccgccgtcgggccgcgtcggcccgctgaccgac
ggcgaacgccagcaggtgatggacaggagcccggttctcggcatctatgacgaagacgtc
gaccgcgaatccgccttcgagatgctggcggcgcgcgccaagaaggcggcggaagctgag
gccgccaagcgggcgcaggaagacgcggccgaacagccgggcacgacctccggctggacc
ctgccgggcttcggcggcgatgacgacaaccgtcagggccgcggcacatcgcgcggtaga
tccggctaccagcgggaaacggtggtggaagcggcgatgaagagcgtggcgcgcacggtc
gccacccaggtcggccgcgcgctggtgcgggggatattggggagcctgaagcggtag
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