Rhizobium etli CFN 42: RHE_CH01239
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Entry
RHE_CH01239 CDS
T00317
Symbol
groELch2
Name
(GenBank) 60 kDa chaperonin, heat shock protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHE_CH01239 (groELch2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ret03019
]
RHE_CH01239 (groELch2)
03110 Chaperones and folding catalysts [BR:
ret03110
]
RHE_CH01239 (groELch2)
03029 Mitochondrial biogenesis [BR:
ret03029
]
RHE_CH01239 (groELch2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ret04147
]
RHE_CH01239 (groELch2)
Enzymes [BR:
ret01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RHE_CH01239 (groELch2)
Messenger RNA biogenesis [BR:
ret03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RHE_CH01239 (groELch2)
Chaperones and folding catalysts [BR:
ret03110
]
Heat shock proteins
HSP60 / Chaperonin
RHE_CH01239 (groELch2)
Mitochondrial biogenesis [BR:
ret03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RHE_CH01239 (groELch2)
Exosome [BR:
ret04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RHE_CH01239 (groELch2)
Exosomal proteins of other body fluids (saliva and urine)
RHE_CH01239 (groELch2)
Exosomal proteins of breast cancer cells
RHE_CH01239 (groELch2)
Exosomal proteins of colorectal cancer cells
RHE_CH01239 (groELch2)
Exosomal proteins of bladder cancer cells
RHE_CH01239 (groELch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABC90044
UniProt:
Q2KAU2
LinkDB
All DBs
Position
1292616..1294244
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKEVKFHSDARERMLRGVDVLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVKEGAKAVASGMNPMDLKRGI
DLAVDAVVGELKANARKISNNSEIAQVGTISANGDAEIGRYLAEAMEKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNQDKMRVELEDPYILIHEKKLSNLQSMLPVLEAV
VQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTAGTV
ISEDLGIKLENVTLNMLGRAKKVAIEKENTTIIDGAGSKAELDGRTAQIRAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALL
RAVKALDSIKTANDDQRVGVDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWN
AQTGEYGDLYAQGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKEAAPAMPAGAGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaaagaagtcaaatttcatagcgatgcccgtgaacgcatgctgcgtggggtc
gatgtgctggccaatgcggtgaaagtgacgctcggcccaaaaggtcgcaacgtggtgatc
gacaagtccttcggcgcgccgcgcatcaccaaggacggcgtttcggtcgccaaggaaatc
gaactcgaagacaagttcgagaatatgggtgcccagatgctgcgtgaagtagcatccaag
acgaatgatctcgccggcgacggtacaacgacggcgaccgttctcgcccaggcaatcgtc
aaggaaggcgccaaggcagtcgcctccggcatgaacccgatggacctgaagcgcggcatc
gatcttgccgtcgacgccgtcgttggggaattgaaagccaacgcccgcaagatctccaac
aattccgaaatcgcccaggtcggaacgatctcggccaacggcgatgccgagatcggccgc
taccttgccgaagccatggaaaaggtcggcaacgaaggcgtcatcaccgttgaagaagcc
aagaccgccgagaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggttatctc
agcccctatttcgtcaccaatcaggacaagatgcgggtcgagctcgaggatccctatatc
ctcatccatgagaagaagctgtcgaacctgcagtcgatgctgccggttctcgaagctgtc
gttcagtccggcaagccgctcctcatcatcgctgaagatgtcgaaggcgaagcccttgct
accctcgtcgtcaacaagctgcgcggcggtctcaagatcgctgccgtcaaggctcccggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctcaccgccggcaccgtc
atctccgaagatctcggcatcaagcttgagaatgtgacgctcaatatgctcggccgcgcc
aagaaggtggcgatcgagaaggaaaacaccaccatcatcgacggtgccggttcgaaggcg
gaactcgacggtcgcaccgctcagatccgcgcccagatcgaagagaccacctccgactac
gaccgcgagaagctgcaggaacgtcttgccaagctcgccggcggcgttgccgtcatccgc
gtcggcggctcgacggaagtcgaggtgaaggagaagaaggatcgcgtcgacgacgcgctt
catgcaacaagggcagcggtcgaggaaggcatcctgccgggtggcggcgtggcgttgctg
cgcgctgtcaaggcgctcgactctatcaagaccgccaatgacgaccagcgcgtcggcgtt
gacatcgtccgccgggcgatcgaggcaccggtccgccagatcgccgaaaacgccggcgcg
gaaggttcgatcatcgtcggcaagctacgggagaagagcgacttctcctatggctggaat
gcccagaccggcgaatatggcgatctctacgcgcaaggcgtcatcgatccggcaaaggtc
gttcgcaccgcacttcaggacgcagcttcggttgccggcctgctggtgacgacggaagcg
atgatcgccgagaagccgaagaaggaagctgctccggccatgccggccggcgccggcatg
gacttctaa
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