Rhizobium etli CFN 42: RHE_CH01372
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Entry
RHE_CH01372 CDS
T00317
Name
(GenBank) hypothetical conserved protein
Organism
ret
Rhizobium etli CFN 42
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4082
DMFA2_C
He_PIG
Cadherin_4
Big_9
Mo-co_dimer
BatD
GlgE_dom_N_S
Motif
Other DBs
NCBI-ProteinID:
ABC90175
RhizoBase:
RHE_CH01372
UniProt:
Q2KAG1
LinkDB
All DBs
Position
1436648..1441777
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AA seq
1709 aa
AA seq
DB search
MYRNSRRWTSRSFLVDSLVPRWLTVGGKERPRKPAEKHAEKHKDSAQLAASVQTADEHKQ
GTLADDPYKDVALNEHEGGQRAHVNGAADNGLEERPLPDTFATPGEMGIPSGDAAALSAL
MPDFASFPGHADGVAFGAGSSLLGDDPLASYLPQSPAPTASGQGAPKVAVGRAHSGKVVI
LESSPSGQPTAHDAGASSLAFGMPFGVCGCGYFTSPTRILDWAHGGALLQQDGQLPGTRL
TEGPDFVATIKQAIGASISDPLLDRDLSPLSGWPGTATWSDAALTNGTLPGGGETGTGTK
SKDSGILSGSVTKPPKTSTQGSSTTQSLAITAAAASNAIVLENQKQGNPESEWGIAGAGS
SNIEGFATDISVDNGKTISFKINTNSTNYRIDIYRLGYYGGMGARKVATLQHTGLQTQPS
PLRNATTGTVDAGNWAVSASWTVPDDAVSGVYIAKLVRQDGTSGSNHIPFIVRDDDSHSD
VVFQTADETWQAYNGWGGANLYGGNGPATGQGAGRAYAVSYNRPIATRGGVGTYAGPQDY
LFGAEYAGIYWLEQNGYDVSYLSGLDVDRYGSLLLNHKTYVDAGHDEYWSGQQRTNVEAA
RDAGVNLMFWSGNEVYWRTRWGNAYSADGTPYRTLITYKETWAGGDIDPSDQWTGTFRDP
RFSPPAIGGGNPENSLTGQLFKVDDVGSNLGAITVGYDDANLRFWRNTSVANLQPGQTAT
LTKNYLGYEWDEAPDNGFDPAGLVKLSSTTLPVSTYLLDYGNTTGNATATHNLTLYRAPS
GALVFGAGTVYWTWGLSDNHDLTATQTDPRVQQAMVNLLADMGIQPGTLQSGLTAATVSL
DHTAPTSVITVPATATVGSTVTITGTAADSGGGVIAAVEVSTDNGASWHPATGDENWTYT
WQPQTTGTYTIRSRAVDDNVNLETPSAGRTVTVSGPNYTSLFGSATPAVVNTNDTSAVEL
GFKFQTSVAGTVTGIRFYKGSQDTGTHTGSLWSSTGTRIATLTFTNETASGWQTAYFTSP
VALTVGQTYTASYHTNSGHYSTTTNYFTSNVTSGPLTAPASGNGVYRYGSNSLFPTSTYQ
STNYWVDVMFTTSGSNTTPTAVADAGDATEKGGVANGSGGAVASGNVLTNDTDPDSGDTK
TVTAVKFGATSGTLGSALNGTYGSLVLNASGAYTYTINESNATVQALRQSTNTLSDVFSY
TMRDSAGATATANLTVTIHGANDAPVLAVQTTTQNATVGSAFSFTLPTTTFSDVDSGDTL
AYAATSADGTALPSWLSFNASTRTFSGTPTAGGTYGVKVTATDLGGLAANETFNIAVSVP
GNTTPTAVADTGDATEKGGVANGSGGAVASGNVLTNDTDPDSGDTKTVTAVKFGATPGTL
GSALNGTYGSLVLNASGAYSYAVNENNATVQALRQSTNTLSDVFSYTMRDSAGATATANL
TVTIHGANDAPVLAVQTTTQNATVGSAFSFTLPTTTFSDVDSGDTLAYAATSADGTALPS
WLSFNASTRTFSGTPTAGGTYGVKVTATDLGGLAANETFNIAVSTAPTTYSLFSASSTPA
RTLNDGQQLELGVKFTSNVAGDVTGIRFYRNANDNGQNVVDLWTATGTKLATATFTTTSA
SGWQTVNFTNPVTIAANTTYVASYHTTGAYVATNNFFTAAVSNGPLTAPASGNGVYAYGG
SATTGLFPTNSYNSTNYYADVVFRPQLVA
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcaattctcgccggtggacttcgcgctcattcctggtggattccttagtgcct
cgatggttgaccgtcggcggaaaggaaagaccgcgcaaacctgccgaaaagcatgccgaa
aagcataaggatagtgctcaacttgcggcatcggtgcaaaccgccgatgaacacaagcag
ggcacccttgccgacgatccctataaggatgtggccctcaacgagcatgagggcgggcag
agagcacacgtgaacggcgccgcggacaacggcctcgaagagcggcccttgcctgacact
ttcgcaacgcctggcgaaatgggaattccaagcggtgatgcggccgcgctgtcagctctc
atgccggattttgcgagtttcccggggcacgcggatggagttgcgttcggggctggatcg
tcccttctgggcgacgatcctctggcttcctatctgccgcaaagccctgcaccgacagct
tcggggcaaggtgctcctaaggtggcggtcgggcgtgctcattcgggcaaggtcgtcatt
ctcgaatcgagcccgtcagggcagccgactgcgcacgacgccggcgcgagttcgctcgct
ttcggcatgccctttggcgtgtgcgggtgcggctactttacttcccccacgcggattctc
gattgggctcatggcggtgccctgcttcagcaggacggtcaattgcccgggaccaggctg
accgaagggccggactttgtggcgacgatcaagcaggccatcggcgcctcgatcagcgat
ccgcttctcgatcgtgacctgtccccgctctcgggctggcccggcactgcaacatggtcg
gacgcggcgctcaccaatggaaccctgcctggcgggggagagacgggaacgggaaccaaa
tccaaggatagcggtatcctgtccggctctgtgacgaagccacctaaaacttctacgcag
gggtcatcgacaacgcaaagtctggcaatcacggcggcggctgccagtaatgccatcgtg
ctggaaaaccagaagcagggcaatccggagagcgagtggggcatcgccggcgccggtagc
tccaatatcgaagggtttgcgaccgacatcagcgtcgacaacggcaaaacgatcagcttc
aagatcaatacaaattccaccaactaccggatcgacatctatcggctcggctattatggc
ggcatgggggcgcgcaaggtcgcgaccctgcagcacaccggattgcagacgcagcccagt
ccgttgcgcaatgccacgaccggaacggtggacgccggcaactgggccgtctcggcgtcg
tggaccgtaccggatgatgccgtctcgggcgtctacatcgccaagctcgtgcgtcaggat
ggcacctccggctcaaatcacattccgttcatcgtgcgcgacgacgacagccacagcgac
gtcgtgttccagaccgcggatgagacttggcaggcttacaacggctggggtggcgcaaac
ctctatggcggcaacgggccggcgacggggcagggtgccggtcgcgcctatgcggtcagc
tacaacaggccgatcgctacccgcggcggggtcggcacctacgccggtccccaggattat
ctgttcggcgccgaatatgcgggtatctactggctggaacagaacggttatgacgtctcc
tacttgtcgggcctcgacgtcgaccgctacggcagcctgttgctcaatcacaagacctat
gtcgatgccgggcatgacgaatactggtcgggacagcagaggaccaatgtcgaggcggcg
cgcgacgcgggcgttaacctgatgttctggagcggcaacgaagtctattggcgtacccgc
tggggcaacgcctatagcgccgacggcacaccttaccgcactctgatcacctacaaggag
acatgggccggcggcgatatcgatccttccgaccaatggaccggtaccttccgcgatcca
cgcttcagtccacctgccattggcggcggcaatccggagaattcgctgaccggccaactg
ttcaaggtcgacgatgtcggcagcaacctcggtgcgatcaccgttggctatgatgatgcc
aaccttcgcttctggcgcaatacgagcgttgccaatcttcagcccgggcagacggcgacg
ctcaccaaaaactatctcggttacgagtgggacgaagcgcccgataacggcttcgatccg
gctggcctggtgaagctgtcgtcgacgacgcttccggtcagcacttacctgctcgattac
ggaaacacgaccggcaatgccaccgcgacccacaatctgacgctctatcgtgcccccagc
ggcgcgctggtgttcggcgccggcacggtctactggacctgggggctcagcgacaatcac
gacctcacggcgacccagacggacccgcgcgtgcagcaggcaatggtcaatttgcttgcc
gatatgggcattcagcccgggacgcttcaatccgggctcaccgccgcaaccgtgtcgttg
gaccacactgcgccgacatcggtcatcacggtgcccgccacggcgaccgtcggatccacc
gtgacgattaccggcaccgctgccgattcggggggcggggtcatcgccgcggtcgaggtt
tcgaccgacaacggggcgagctggcatccggcgaccggcgatgagaactggacctatacc
tggcaaccgcaaaccacgggcacctataccatccggtctcgcgcagtcgatgataacgtc
aatctggaaacgccctcggcgggacgaacggtcaccgtcagcggaccgaattacacctct
ctcttcggttcggcgacgccagcggtcgtcaacaccaacgatacctcggccgttgaactc
ggcttcaaattccagacctccgtggcaggaacggtcaccggcattcgtttttataagggc
agccaggataccggtacgcacaccggttcactgtggtcgagtaccggcacccggattgcg
accctcaccttcacgaacgagactgccagcggctggcagactgcttatttcaccagtccc
gtggcgctgacggtcggccaaacctacacggcgtcttatcacacgaacagcggtcattat
tcgacgaccaccaactacttcacctcaaatgtgaccagcggtccgctgactgcaccagcc
agcggcaacggcgtctaccgctacggcagcaacagccttttccccacaagcacttaccag
tcgacgaattattgggtcgacgtgatgtttacgacgtcgggctcgaacacgacgccgacg
gcggttgccgatgcgggtgacgcgaccgagaagggcggggtggccaatggttcgggcggc
gcggttgccagcggcaatgtgctgaccaatgacaccgatccggattccggtgacaccaag
acggtgaccgcggtcaaattcggcgcgacgtcgggcacgctcggctcggcgctgaacggc
acctatggcagcctcgtgctcaatgcttcgggcgcttacacctatacgatcaacgagagc
aatgcgaccgtccaagcgctgcgccagtcgaccaacacgctgagcgatgtcttcagctac
acgatgcgcgacagtgccggcgccaccgccacggcgaacctgaccgtcaccatccatggc
gccaacgatgcgccggtgttggccgtccagacgacgacccagaacgccacggtcggctcc
gccttctccttcaccctgccgacgacgaccttcagcgatgtcgacagcggcgacacgcta
gcctatgcggcaacgtccgccgatggcacggcgctgccttcctggctgagcttcaatgcc
tcgacgcggaccttctccggcacgccgactgcaggcggtacttacggcgtcaaggtgacg
gcaaccgatctcggcggccttgctgccaacgagaccttcaacatcgccgtgtcggtgcct
ggcaacacgacgccgacggcagttgccgatacgggggatgcgaccgagaagggtggtgtg
gccaatggttcgggcggcgcggttgccagcggcaatgtgctgaccaatgacaccgatccg
gattccggtgacacgaagacggtgaccgcggtcaaattcggcgcgacgccgggcacgctc
ggctcggcgctgaacggcacctacggcagcctcgtgctcaatgcatcgggcgcctatagc
tatgccgtcaacgagaataatgcgaccgtccaagcactgcgccagtcgaccaacacgctg
agcgatgtcttcagctacacgatgcgcgacagcgccggcgccacagcgacggcaaacctg
accgtcaccatccatggcgccaacgatgcgccggtgttggccgtccagacgacgacccag
aacgccacggtcggctccgccttctccttcaccctgccgacgacgaccttcagcgatgtc
gacagcggcgacacgctagcctatgcggcaacgtccgccgatggcacggcgctgccttcc
tggctgagcttcaatgcctcgacgcggaccttctccggcacgccgactgcaggcggtact
tacggcgtcaaggtgacggcaaccgatctcggcggccttgctgccaacgagaccttcaac
atcgccgtgtcgacggcgccgacgacctacagcctgttctccgcctccagcacgccggcc
cgaaccctcaacgatggtcagcagctcgaacttggcgtcaagttcacgtcgaacgttgcc
ggggacgtcaccggcatcaggttctatcgcaacgccaatgacaacggccagaatgtcgtc
gacctttggaccgcgacgggcaccaagcttgctaccgccaccttcaccaccaccagcgcg
agcgggtggcagaccgtgaacttcacaaaccccgtcaccatcgccgctaataccacttat
gtcgcctcctatcacacgacaggcgcttacgtggcgaccaataatttcttcaccgccgcc
gtctccaacggtccgttaacggcgccggccagcggcaatggtgtttatgcctacggcggc
tctgccaccacgggccttttcccgactaacagttacaattcaaccaattactacgccgac
gtcgtcttccggccgcaactggtcgcgtga
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