Rhizobium etli CFN 42: RHE_CH01401
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Entry
RHE_CH01401 CDS
T00317
Name
(GenBank) putative mechanosensitive ion channel protein
KO
K03442
small conductance mechanosensitive channel
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH01401
Transporters [BR:
ret02000
]
Other transporters
Pores ion channels [TC:
1
]
RHE_CH01401
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
DUF2208
DUF3810
Motif
Other DBs
NCBI-ProteinID:
ABC90204
RhizoBase:
RHE_CH01401
UniProt:
Q2KAD2
LinkDB
All DBs
Position
complement(1474351..1475232)
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AA seq
293 aa
AA seq
DB search
MEQQAADVLLATRTALSQASALAVQYSFSVLGALILLVIGWTLAGFVSRWAYEGLSRIHG
IDETLARFFTNVVRYALLILVFITVLGQFGVQTASIIAALGAAGLAIGLALQGTLQNIAA
GIMLLILRPFRVGEYIETSSVAGTVREVGLFATELRTGDGLYRLAPNSTLWNTPITNFSR
EPTRQNDLKISISREDDLDLSMETLMGIAKGNPRVLQSPAPSVFIDTLGDSTISLTLRYW
AKTGDWWQVSRDMVKRVKLAFDEKGDPAAVRDGGNSTLGGRSNGTAREKPTRQ
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacaagcagccgacgtcctcctcgccacccgcacggcactcagccaggcaagc
gctcttgcagtccaatattccttctccgtcctcggcgctttgatcctgctcgtcatcggc
tggacgctggccggctttgtcagccgctgggcctatgagggcctgtcgcgcatccatggc
atcgacgagacactggcgcgtttcttcaccaatgtggtgcgttatgcgctgctgattctg
gtgttcatcaccgtgctcggccaattcggcgtccagaccgcctcgatcatcgccgccctc
ggcgcagccggcctggcgattgggctggcgctgcaagggacactgcagaatatcgcggcc
ggtatcatgctcctgatcctcaggccgttccgggtcggcgaatatatcgaaaccagcagc
gtggccggcacggtgcgcgaggtcggattgtttgcgacagaactcagaaccggcgacggg
ctttatcgactggcgccaaattcaacgctgtggaacacgccgatcaccaacttcagccgt
gaacctacgcggcagaacgacctgaaaatcagcatttctcgtgaggatgacctcgatctg
tcgatggagaccttgatgggtattgccaaaggcaacccaagggtgctgcagtcaccggca
cccagcgttttcatcgacaccctcggtgacagcacgatatcgctaacgttgcgctactgg
gcaaagaccggtgactggtggcaggtcagccgcgacatggtgaagcgagtaaaacttgcc
ttcgacgaaaagggcgatccagccgctgtgcgggacggtggaaattccaccctgggagga
aggtccaacgggaccgcgagggaaaagccgaccaggcagtga
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