Rhizobium etli CFN 42: RHE_CH01507
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Entry
RHE_CH01507 CDS
T00317
Name
(GenBank) putative peptidoglycan binding protein (involved in cell wall degradation)
KO
K21470
L,D-transpeptidase YcbB
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ret01002
]
RHE_CH01507
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ret01011
]
RHE_CH01507
Peptidases and inhibitors [BR:
ret01002
]
Cysteine peptidases
Family C82
RHE_CH01507
Peptidoglycan biosynthesis and degradation proteins [BR:
ret01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RHE_CH01507
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABC90310
UniProt:
Q2KA26
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All DBs
Position
1583995..1585296
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AA seq
433 aa
AA seq
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MSKKNGNEALSRRAFLASAATIGAGAMAAPALAQSALDTLINAPRRGNWDDQFDAKAASR
TATAVVSNTPILGPQSVASAQQAIMQYQQIAAAGGWPEVNPGDQRLQLGVSSPAVQVLRQ
RLAITGDLPREAGMSNAFDSYVDGAVKRFQARHGLPSDGVLGEFTLKAMNIPADVRLQQL
NTNLVRLQTFPEDLGRRHLMVNIPAAYVEAVEDGSVATRHTAVVGRLSRPTHLVNSKIYE
VILNPYWTAPRSIVEKDIMPLMRKDPTYLEKNAIRLIDGKGNEVSPETIDWNGEAPNLQF
RQDPGKINAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLSTWLLR
ETPGWSRQQMEQVIASGVNTPIKLATEVPVYFVYISAWGMPDGIVQFRDDIYQMDGNAEL
ALDTTAGMEQPVQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaaaacggaaatgaagctctctcgcgccgcgctttccttgcgtccgcggca
acgattggcgccggcgcgatggccgcgccggcattggcgcagtcggcgctcgatacgctg
atcaacgcaccgcgccgcggcaactgggacgaccagttcgatgcgaaggcggcttcgcgc
acggcgaccgctgtcgtttccaacacgccgatccttggtccccaatcggtcgcgagtgcc
cagcaggcgatcatgcagtatcagcagattgcggccgccggcggctggcctgaagtcaat
cccggtgatcagcgcctgcagctcggcgtttcctctcccgccgttcaggtgctgcgccag
cgccttgcgatcaccggcgacctgccgcgcgaggcaggcatgtcgaatgccttcgattcc
tatgtcgacggcgcagtcaagcgcttccaggcgcgtcacggcctgccgtccgacggcgtt
ctcggcgaattcacgctgaaggcgatgaacattccggccgatgtccgtctgcagcagttg
aacaccaatctggttcgcctgcagactttcccggaagatctcggccgccgccacctgatg
gtcaacattccggccgcctatgtcgaggctgtggaagacggcagcgttgcgacgcgccat
accgcggtcgtcggccgtctgagccgcccgacgcatctcgtcaattcgaagatctacgaa
gtcatcctcaatccctactggaccgcgccgcgctcgatcgtcgaaaaggacatcatgccg
ctgatgcgcaaggatccgacctatctcgaaaagaatgcgatccgcctgatcgacggcaag
ggaaatgaggtttctccggagactatcgattggaacggcgaggcgccgaacctgcagttc
cgccaggacccgggcaagatcaacgccatggcgtcgacgaagatcaacttctacaacaaa
aacggcgagtacatgcacgacacgccgcagcagggcctgttcaacaagcttatgcgtttc
gaatcgtcgggctgcgtccgcgttcagaacgtgcgcgacctgtcgacttggctgttgcgc
gagacgccgggctggagccgccagcagatggagcaggtgatcgcaagcggcgtcaacacg
ccgatcaagctcgccaccgaagttccggtctacttcgtctacatctccgcctggggcatg
cccgacggcatcgtccagttccgcgacgacatctatcagatggacggcaatgccgaattg
gcgctcgataccacggctggcatggaacagccggtgcaataa
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