Rhizobium etli CFN 42: RHE_CH01699
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Entry
RHE_CH01699 CDS
T00317
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain protein
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RHE_CH01699 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ret03021
]
RHE_CH01699 (rpoA)
03400 DNA repair and recombination proteins [BR:
ret03400
]
RHE_CH01699 (rpoA)
Enzymes [BR:
ret01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RHE_CH01699 (rpoA)
Transcription machinery [BR:
ret03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RHE_CH01699 (rpoA)
DNA repair and recombination proteins [BR:
ret03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RHE_CH01699 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
ABC90494
UniProt:
Q2K9J2
LinkDB
All DBs
Position
1781361..1782371
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFSSSSRTRATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLNMTIETDGSITGEDAVAFAARILQDQLGVFVNFDEPQKETEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaactggcaggaactgatcaagccgaacaaggtggagttctcctcgagc
tcgcgcaccagggcgacgcttgtcgccgaaccgctggagcgcggcttcggtctcaccctc
ggcaacgcgctgcgccgcgttctgctctcctcgctgcgcggtgctgccgtcacggcggtg
cagatcgacggcgtgctgcatgaattctcctcgattcccggcgtccgcgaagacgtcacg
gatatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgacgcaaagcgc
atggtcgtgcgcaagcagggcccgggcgttgtcacggctggcgacattcagacggtcggc
gatatcgaaatcctcaaccccgagcatgtgatctgcacgctcgacgagggtgccgaaatc
cgcatggaattcaccgtcaacaacggcaagggctatgttccggccgaacgcaatcgtgcg
gaagatgctccgatcggccttatcccggtcgacagcctctattcgccggtcaagaaggtg
tcctacaaggttgaaaatacccgcgaaggacaggttctcgactacgacaagctgaatatg
accatcgaaaccgatggctcaatcaccggcgaggacgccgtcgctttcgcggcgcgcatc
ctccaggatcagcttggcgtcttcgtcaacttcgacgagccgcagaaggaaaccgaagag
gaagcagtcaccgaactcgctttcaacccggctctcctcaagaaggtggacgaactcgaa
ctgtcggtccgttcggcaaactgcctgaagaacgacaacatcgtctacatcggcgacctc
attcagaagaccgaagcagaaatgctccgcacgccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccggcatgg
ccgcccgagaacatcgaagatctcgccaagcgttacgaagaccaatattga
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