Rhizobium etli CFN 42: RHE_CH01892
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Entry
RHE_CH01892 CDS
T00317
Name
(GenBank) putative RTX toxin hemolysin-type calcium-binding protein
Organism
ret
Rhizobium etli CFN 42
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
ABC90678
UniProt:
Q2K908
LinkDB
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Position
complement(1972383..1974485)
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AA seq
700 aa
AA seq
DB search
MTTYYVASSSSGGGNGSASSPFRTISEAMASDLKPGDEVVVKPGTYNESINIDKDGSAAG
DITLRSEVPGGALIRPPAGSWNAISVNANHVVIDGFDIGGANGDGIEANNVHHVQILNNK
VHGSGESGIQFNQSDFIHIEGNETYNNASTGWFSGISIYQNRNITGDTSTDGYRNIVRNN
ISHDNVTKTGEHTDGNGIIIDDFQSTQASGNPNYTFKTLVDNNLVYGNGGKGIQVTWSDS
VTVSNNTAYHNNQDPQNSGTWRGELSNSASSNNTWVNNIAVADPSLNKNNTAIDNTSTDA
YTNKNVVWANNITYNGTAGQASVKTDGGNAMPSTANGNQLGVDPKFAGASSDNFHLSSGS
TAIDHGTSKYGVSSVDLDGDHRVVGTVDMGAYESGSSPTSGTPTTPTSPTAPTSPTSPTA
PTSPTSPTAPTSPTEPTSPTTGTPTTETPTTGTPTTTTKLYTGTNGNDIMPHDGQSNGGN
ETFKGLAGNDLLKGGAGADVIDGGSGNDTASYAGSNAGVHVSLATWTASGGHATGDKLVS
IENVTGSSYDDVLTGGNNGGNVLNGGAGADKLDGGAGGDVIIGGAGKDIMTGGTSSDTFV
FKTATETGSGWNRDVITDFQHGVDKIDLSAIDANGSAQGDSAFHFQAQENALFDKKAGAL
AWHYEDDHTVIQADLNGDGVHDFEIQLNGHVQLGAGDFLL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatactacgtagcttcgagcagcagcggcggcggtaacggcagtgcctcctct
ccttttcgcacgatcagtgaggcgatggcttcggaccttaagcctggcgacgaggtcgtg
gtgaagcccgggacctacaacgagagcatcaacatcgacaaggacggctcggcggccggc
gacatcacgctgcgttcggaagtgcccggtggggcgctgatccggccgcccgcgggctcg
tggaacgcgatcagtgtcaacgccaaccacgtggtcatcgacggctttgacatcggcggc
gccaacggcgacggcattgaagcgaacaatgtccaccacgtccagatcctcaacaacaag
gtccacggcagcggagagtcgggcatccagttcaaccagtcggacttcatccacatcgaa
ggcaacgagacttacaataacgcttcgacaggctggttctcgggcatctccatctaccag
aaccggaacatcaccggtgatacctcgacggacggataccggaacatcgtgcgcaacaac
atctcgcacgacaacgtcacaaaaactggtgagcacaccgacggcaacggcatcatcatc
gacgacttccagagcacgcaggcgagcggtaacccgaactacacgttcaagaccctggtc
gacaacaacctcgtctacgggaacggcggcaaaggcatccaggttacctggagcgactcc
gtcactgtgtcgaacaacaccgcataccacaacaaccaggacccgcagaacagcggcacc
tggcgcggcgaactcagcaactcggcgtcgagcaacaacacctgggtcaacaacatcgcc
gtagcggatccatcgctgaacaagaacaataccgcgatcgataatacgtctaccgacgcc
tacaccaacaagaacgttgtctgggccaacaacatcacttacaacggcacggccggccag
gcctcggtcaaaaccgatggcggcaacgcgatgccgagcacggcgaacggcaaccagctc
ggcgttgaccctaaattcgcaggggcatcgagcgacaacttccacctcagctccggctcg
acggcgatcgaccacggaaccagcaagtacggcgtcagctccgtcgatctggacggcgac
catcgcgtcgttggaactgtcgatatgggtgcctacgaatccggctccagccccacatcg
ggaacgccaactacgccgacttcgccaaccgcgccgacttcaccgacttcgccaaccgcg
ccgacttcaccgacttcgccaaccgcgccgacttcgccaacggagccgacttcgccaacc
accggtaccccgactacggagacgccaaccacgggaacgccaaccacaacgacgaagcta
tacaccggcaccaacggtaacgacatcatgccacacgacggtcagtccaacggcggcaac
gaaaccttcaaggggctcgccggcaatgacctgttgaagggcggcgccggcgcggacgtg
atcgacggcggtagcggcaacgacacagccagctatgcgggctccaacgcgggggtccac
gtcagcttggcgacttggaccgcatcgggcgggcacgccactggtgacaagctcgtcagc
atcgaaaacgtgaccggctccagctacgacgacgtgctgaccggcggcaacaacggcggc
aacgttctcaatggcggggccggcgcggacaagctggacggcggcgccggcggggatgtc
atcattggcggtgccgggaaggacatcatgaccggtggcaccagctcggatacgtttgtc
ttcaagacagcgacggagaccgggtccggctggaaccgcgacgtcatcaccgacttccag
catggcgtcgataagatcgatctctcggcgatcgatgcgaatggctctgcgcagggcgat
tcagccttccatttccaggcgcaggagaatgccttgttcgataagaaggctggcgcgctc
gcatggcactacgaggacgaccataccgttatccaggccgatttgaacggcgacggtgtt
catgacttcgagattcagctgaacggccacgtccagctgggggcaggcgattttctcctg
taa
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