Rhizobium etli CFN 42: RHE_CH01920
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Entry
RHE_CH01920 CDS
T00317
Symbol
omp1
Name
(GenBank) outer membrane lipoprotein
KO
K07277
outer membrane protein insertion porin family
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ret03029
]
RHE_CH01920 (omp1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_CH01920 (omp1)
Mitochondrial biogenesis [BR:
ret03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
RHE_CH01920 (omp1)
Transporters [BR:
ret02000
]
Other transporters
Pores ion channels [TC:
1
]
RHE_CH01920 (omp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_2
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
ABC90706
RhizoBase:
RHE_CH01920
UniProt:
Q2K8Y0
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Position
2001189..2003528
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AA seq
779 aa
AA seq
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MKAGSKFLNAVSAVALSAGVVASGAGAVTFVSATAAEAAVIQRIDVRGASRVGAEAVRSN
LTITPGKSFSNTDIDNSVKQLYGTGYFSDVKISVSGGTLVVNVQEAQLVNQVVFNGNRKI
KDDKLATIVQTHAAGPYSDTQIQSDIQAIKDAYAATGRSEVEVTTQVVPLGEGRVNLAFV
INEGDRTKIDSINFVGNNAYSAGRLAAVINTKRSNFLSFLTRKDVYNEDKLHADEEALRQ
FYYNRGYADMRIVSSDASFDEATNKYTLTFNIEEGQRYDFGPVTVQSTVEGVGSDQLLPL
VRTKEGHVYSAKEVQKSIEAISDQVASAGYPFARVTPRGNRDLNNNTIGVEYLVDQGERA
YVERIEIRGNSRTRDYVIRREFDMSEGDAFNQQMITKAKRRLEALGYFSSVNISTQPGSS
PDRVVVVVDVQDQSTGSFGVGAGYAAGGDGLLLEASIEEKNFLGRGQYIRISAGGGQEGS
RAYGVSFTEPYFLGYRLAAGFDVNHSETSSNDNYDYEETSVVLRVTAPITEDLATTFRYN
YKQMKYDADNSDLSDLSAPYQHLVEDSPWTRSSVSQTLTYNTLDDTVLPREGIYATATQE
IAGLGGDSQFYKIYGKARYYHLLADDADIIGSVSASAGYVVGFGEHLNVFDQFTLTNGDI
RGFENKGIGPRVRGDNDDPLGGTTYFTASAEATFPMPGFPRDFNLRGAVFADAGTLFGND
VDLRGDGIEGEDASLRASVGVGVVWQSPFGSLRLDYAIPVLKEDFDKTQNFKFGINNQF
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctggttcaaagtttttgaacgcagtatcggcggttgcgctgtctgctggtgtt
gttgcttcgggcgcaggtgctgtgacgttcgtttctgctacggccgctgaggccgcggtc
attcaacgcatcgatgtgcgtggcgcaagccgcgtcggcgcggaagccgtccggtcgaac
ctcaccatcacgcccggcaagagtttctcgaacactgatatcgataactcggtcaaacag
ctttacggcacgggctacttttccgacgtgaagatttcggtttccggcggcacgctcgtt
gtcaatgtccaggaggcccagctcgtcaatcaggtcgtcttcaacggcaaccgtaagatc
aaggacgacaagctcgcgacgatcgtccagacgcatgctgccggtccttacagtgacacg
cagatccagtccgacatccaggcgatcaaggatgcctatgctgccaccggccgcagcgaa
gtcgaagtgacgacgcaggtggtgccgctcggcgagggccgcgtcaatctcgcctttgtc
atcaacgagggcgatcgcaccaagatcgattcgatcaatttcgtcggcaacaacgcctac
agcgccggccgtctggctgccgtcattaataccaagcgctcgaacttcctttcgttcctg
acccgcaaggacgtctacaacgaagacaagcttcacgccgacgaggaagcgctgcgccag
ttctattataatcgcggctatgccgatatgcgcatcgtctcttccgatgccagcttcgac
gaggcgaccaacaaatacacgctcaccttcaatatcgaggaaggtcagcgctacgacttc
ggaccggtgaccgtccagtcgaccgtcgaaggcgtcggctccgatcagctgctgccgctc
gtgcgcacgaaggaaggccacgtctatagcgccaaggaagtgcagaagtcgatcgaagcg
atctctgatcaggtcgcgtcggccggttatccctttgcgcgcgtcacgccgcgcggtaac
cgcgacctcaacaacaatacgattggcgtcgaatatctcgtcgaccagggcgagcgcgcc
tatgtcgagcgcatcgagatccgcggcaacagccgtacgcgcgactacgtcattcgccgc
gaattcgacatgagcgaaggcgacgccttcaatcagcagatgatcaccaaggccaagcgc
cgcctggaagcgctcggttacttctcttccgtcaatatctccacccagccgggcagttcc
ccggaccgtgtcgtggtggtggtcgacgtgcaggatcagtcgaccggttcgttcggtgtc
ggcgctggttatgccgctggcggtgacggtctgctgctcgaagcatcaatcgaagaaaag
aacttccttggtcgcggtcagtacatccgcatctcggccggcggcggtcaggaaggctcg
cgcgcctacggcgtcagcttcaccgaaccctatttcctcggctaccgcctggcggcgggc
ttcgacgtcaaccacagcgaaacgtcgagcaacgacaattacgactacgaggaaaccagc
gtcgttctgcgcgtcacggcgccgatcaccgaagatctggcgacgactttccgctataac
tacaagcagatgaagtacgacgctgacaacagcgatctttccgatctgtcggctccgtat
cagcacctggttgaagacagcccgtggacacgttcttccgtctcgcagacgctgacctat
aacacgctcgatgacacagttctgccgcgcgaaggcatctacgcgacggcgacgcaggaa
attgccggcctcgggggcgactcgcagttctacaagatctacggcaaggcccgctattac
cacctgctcgccgacgatgcagatatcatcggctcggtttcggcgtcggccggttatgtg
gtcggcttcggcgagcacctgaacgtcttcgaccagttcacgctgaccaatggcgacatt
cgcggtttcgagaacaagggtatcggtccgcgcgtcaggggtgacaacgacgatccgctg
ggcggtacgacatacttcaccgcatcggccgaagcgactttcccgatgccgggcttcccg
cgcgacttcaacctgcgcggcgcggtcttcgccgacgccggcacgttgttcggcaacgac
gttgacctgaggggcgacggtattgagggcgaagacgcctcgttgcgcgcttccgttggt
gtcggtgtcgtttggcagtcccctttcggttcattgcgtctggattacgcaatcccggtc
ctcaaggaagacttcgacaagacgcaaaacttcaagtttggcatcaacaaccaattctga
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